Pairwise Alignments

Query, 375 a.a., carbamoyl-phosphate synthase, small subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 376 a.a., carbamoyl-phosphate synthase small chain from Marinobacter adhaerens HP15

 Score =  312 bits (800), Expect = 8e-90
 Identities = 168/366 (45%), Positives = 226/366 (61%), Gaps = 6/366 (1%)

Query: 3   ALLALEDGFVLEGRSFTGPGETGGEAIFNTGMTGYQEVLTDPSYAGQMVCMTYPLVGNYG 62
           A+LAL DG +  G +    GET GE +FNT MTGYQE+LTDPSY+ Q+V +TYP +GN G
Sbjct: 5   AILALADGSLFYGTAIGADGETSGEVVFNTAMTGYQEILTDPSYSRQIVTLTYPHIGNTG 64

Query: 63  VTREDMESGKVHVEAFIVKECCKVPSNWRSEISLPDYLKRHGVMGIEGIDTRALTRHLRI 122
           V  ED+ES ++     I+++   + S+WRS+ +L DYL+ + ++GI  IDTR LTR LR 
Sbjct: 65  VNEEDVESDRIQAAGLIIRDLPLLASSWRSKGTLDDYLRSNNIVGIADIDTRRLTRILRD 124

Query: 123 HGAMRGVISTQETDPA-RLVERARALPSMEGQNLVTRVAPAAPYRWDGERPQAVTLEPGG 181
            G+  G I   E   A R +E A+A P ++G +L   V     + W   +    TLE G 
Sbjct: 125 KGSQNGAIVAGENATAERALELAKAFPGLKGMDLAKEVTSDKTWSW---KETEWTLEEGY 181

Query: 182 CAWVGKGPRLVVYDFGIKWNILRLLAQQGFDMLVVPPSFKAADVAAVGAQAVFLSNGPGD 241
                   ++V +D+G+K NILR+LA +G D+ VVP    A++V A+    VFLSNGPGD
Sbjct: 182 GEREESRFKVVAWDYGVKLNILRMLASRGCDITVVPAQTPASEVLAMNPDGVFLSNGPGD 241

Query: 242 PATLKDEIAEIAKLAQT-YPTAGICLGHQLLGHALGGRTMKLKFGHHGCNHPVKDLTTGR 300
           P      I  I ++ +T  P  GICLGHQLL  A G +TMK+  GHHG NHPV+++ TG 
Sbjct: 242 PEPCDYAITAIKEVLETEIPVFGICLGHQLLALASGAKTMKMGHGHHGANHPVQEIATGT 301

Query: 301 IEISSQNHGFCVDIDSL-TDVEITHVNLNDGTLEGFAHKTKPVIAVQHHPEASPGPNDSR 359
           + I+SQNHGF VD  +L  +VE TH +L DGTL+G     KP  + Q HPEASPGP+D  
Sbjct: 302 VMITSQNHGFAVDEATLPANVEATHKSLFDGTLQGIRRTDKPAYSFQGHPEASPGPHDVA 361

Query: 360 YFFARF 365
             F  F
Sbjct: 362 PLFDEF 367