Pairwise Alignments

Query, 375 a.a., carbamoyl-phosphate synthase, small subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 389 a.a., carbamoyl-phosphate synthase, small subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  305 bits (782), Expect = 1e-87
 Identities = 175/373 (46%), Positives = 216/373 (57%), Gaps = 16/373 (4%)

Query: 3   ALLALEDGFVLEGRSFTGPGETGGEAIFNTGMTGYQEVLTDPSYAGQMVCMTYPLVGNYG 62
           A L L DG V  GR F   G T  E  FNT MTGYQE++TDPSYAGQ+V  T+P +GN G
Sbjct: 10  ACLVLADGTVFYGRGFGAVGTTSAELCFNTAMTGYQEIMTDPSYAGQVVTFTFPHIGNTG 69

Query: 63  VTREDMESGKVHVEAFIVKECCKVPSNWRSEISLPDYLKRHGVMGIEGIDTRALTRHLRI 122
           VT ED E+        +VK     PSNWR++  L ++L R G +GI G+DTR LTR +R 
Sbjct: 70  VTAEDDEAADPVAAGMVVKWDPSEPSNWRAQGKLTEWLTRTGRIGIGGVDTRRLTRQIRQ 129

Query: 123 HGAMRGVISTQ---ETDPARLVERARALPSMEGQNLVTRVAPAAPYRWDGER---PQAVT 176
            GA    ++       D   LV +ARA   +EG +L   V  A  YRWD +R   P+  T
Sbjct: 130 QGAPHVALAHDPEGNFDLEALVAQARAFAGLEGVDLAREVTCAQSYRWDEQRWAWPEGYT 189

Query: 177 LEPGGCAWVGKGPRLVVYDFGIKWNILRLLAQQGFDMLVVPPSFKAADVAAVGAQAVFLS 236
                      G ++V  D+G K NILR LA  G D+ V+P +  A DV A     VFLS
Sbjct: 190 RR------TTPGHKVVALDYGAKRNILRCLASAGCDVTVMPATSTAEDVLAQNPDGVFLS 243

Query: 237 NGPGDPATLKDEIAEIAK---LAQTYPTAGICLGHQLLGHALGGRTMKLKFGHHGCNHPV 293
           NGPGDPA        + K    A   P  GICLGHQ+L  ALG +T+K+  GHHG NHPV
Sbjct: 244 NGPGDPAATGKYAVPMIKGVLEASDVPVFGICLGHQMLALALGAQTVKMNHGHHGANHPV 303

Query: 294 KDLTTGRIEISSQNHGFCVDIDSLT-DVEITHVNLNDGTLEGFAHKTKPVIAVQHHPEAS 352
           KDL TG++EI+S NHGF VD  +L   V  TH +L DG+  G     +PV +VQ+HPEAS
Sbjct: 304 KDLETGKVEITSMNHGFTVDSQTLPHGVVETHRSLFDGSNCGIRMTDRPVFSVQYHPEAS 363

Query: 353 PGPNDSRYFFARF 365
           PGP DS Y F RF
Sbjct: 364 PGPQDSYYLFERF 376