Pairwise Alignments

Query, 375 a.a., carbamoyl-phosphate synthase, small subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 386 a.a., carbamoyl phosphate synthase small subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  310 bits (794), Expect = 4e-89
 Identities = 166/372 (44%), Positives = 227/372 (61%), Gaps = 3/372 (0%)

Query: 3   ALLALEDGFVLEGRSFTGPGETGGEAIFNTGMTGYQEVLTDPSYAGQMVCMTYPLVGNYG 62
           ALL LEDG V  G +    G + GE +FNT MTGYQE+LTDPSY+ Q+V +TYP +GN G
Sbjct: 9   ALLVLEDGTVFTGTAIGADGLSVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNTG 68

Query: 63  VTREDMESGKVHVEAFIVKECCKVPSNWRSEISLPDYLKRHGVMGIEGIDTRALTRHLRI 122
              ED+ES  VH    I+++   V S++R++ +L DYLK + V+GI  IDTR LTR LR 
Sbjct: 69  TNNEDVESNGVHACGLIIRDLPLVASSFRNQQTLSDYLKANNVVGIADIDTRKLTRILRE 128

Query: 123 HGAMRG-VISTQETDPARLVERARALPSMEGQNLVTRVAPAAPYRWDGERPQAVTLEPGG 181
            GA  G +++  + D A+ +  A+A P ++G +L   V     Y W     + V   P  
Sbjct: 129 KGAQAGCIMAGADLDEAKALAAAKAFPGLKGMDLAKEVTTDKAYPWRKGSWRLVGGLPED 188

Query: 182 CAWVGKGPRLVVYDFGIKWNILRLLAQQGFDMLVVPPSFKAADVAAVGAQAVFLSNGPGD 241
                   ++V YD+G+K NILR+L  +G D+ VVP    AADV A+    VFLSNGPGD
Sbjct: 189 TPAEALKYKVVAYDYGVKQNILRMLVDRGCDVTVVPAKTSAADVLAMNPDGVFLSNGPGD 248

Query: 242 PATLKDEIAEIAKLAQT-YPTAGICLGHQLLGHALGGRTMKLKFGHHGCNHPVKDLTTGR 300
           P      I  I ++ +T  P  GICLGHQLL  A G +T+K+KFGHHG NHPV ++  G 
Sbjct: 249 PEPCDYAIEAIQQILKTDTPIFGICLGHQLLALASGAKTLKMKFGHHGANHPVSNIEKGN 308

Query: 301 IEISSQNHGFCVDIDSL-TDVEITHVNLNDGTLEGFAHKTKPVIAVQHHPEASPGPNDSR 359
           + I+SQNHGF  D  +L  ++++TH +L DG+L+G     KP  + Q HPEASPGPND+ 
Sbjct: 309 VMITSQNHGFAADEATLPANIKVTHKSLFDGSLQGIHLTDKPAFSFQGHPEASPGPNDAA 368

Query: 360 YFFARFRNMVRE 371
             F  F  ++ +
Sbjct: 369 PLFDHFIELIEQ 380