Pairwise Alignments

Query, 577 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 557 a.a., Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  260 bits (665), Expect = 9e-74
 Identities = 177/512 (34%), Positives = 258/512 (50%), Gaps = 36/512 (7%)

Query: 43  DLAPRLQEACIRAGWQSLMPVQAHALPYLFDGRDLMVQSRTGSGKTGAFLLPLLERLDPA 102
           +L P +  A +  G++    +Q  ++P +  G D++ Q++TG+GKT AF LP+L R+DP+
Sbjct: 12  ELHPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILHRIDPS 71

Query: 103 EASTQALVLVPTRELALQVEHEARTLFEGT-GLRVAAVYGGVGYGKQNDALREGAHFVVG 161
           +   QAL+L PTRELALQV     T  +   G+ V AVYGG   G Q  A+R GA  VV 
Sbjct: 72  KREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLKAIRNGAQIVVA 131

Query: 162 TPGRVLDHLLRRTMQLDRLRALTFDEADRMLSIGFYPDMKEIQRYLPKRRIATCLFSATY 221
           TPGR+ DHL R    L  +  L  DEAD ML +GF  D++ I + +P+ R  T LFSAT 
Sbjct: 132 TPGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKAMPETR-QTVLFSATL 190

Query: 222 PPHVLNLAGEFLREPQMLSLSHSQVHVAQTQHMFCESKPMDKDRALIRLLEIENPSSAII 281
           P  +  +A   LR+P+ + +      V   +          K  A++ LLE+E+  + I+
Sbjct: 191 PQSIRAIAERHLRDPKHVKIQTKTQTVTAIEQAHLLVHADQKTSAVLSLLEVEDFDALIM 250

Query: 282 FCNTKANVHYITAVLQGFGYNADELSADLSQSKREQVLERLRNNEVRFLVATDVAARGID 341
           F  TK     + + L+  GY A  L+ D++Q++RE+V+E L++  +  +VATDVAARG+D
Sbjct: 251 FVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIESLKDGRLDIVVATDVAARGLD 310

Query: 342 IPALSHVILYEPPEDRESYIHRAGRTGRAGAVGTVISLVDIMQKLELQRIARHYRMDIAH 401
           +P ++HV   + P D ESY+HR GRTGRAG  G  + LV   ++  LQ I R     +A 
Sbjct: 311 VPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVIERVTGQKVAE 370

Query: 402 RPTPQDEDVARVVGDRLTALLEGAYRQCTGLQRERIQRFT-DVA---RTLAADEEQVVLL 457
              P  + V      +LT  L            + + R T D+    R LAA        
Sbjct: 371 VRLPDAQAVLDARIKKLTNSLSPLVADAESTHGDLLDRLTADIGCSPRALAA-------- 422

Query: 458 AMLLDEKYQQSLHAMPPRPRPQRASASRAVDSESDTAPRRRSRGRRDDEGSTGGD----E 513
                        A+  +    +A    A++ E    P    RG R +  S  GD    E
Sbjct: 423 -------------ALLRKATNGQALTLAAIERERPLVPNNAPRGDRPERSSDRGDRPERE 469

Query: 514 RKT----APRTAPSRTTAGA-EGASAHEDTGA 540
           R+     A   A  RT  GA +G +A    GA
Sbjct: 470 RRAPVPLAEGRARCRTALGARDGIAAKNLLGA 501