Pairwise Alignments

Query, 577 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 640 a.a., DEAD/DEAH family ATP-dependent RNA helicase from Rahnella sp. WP5

 Score =  273 bits (698), Expect = 2e-77
 Identities = 187/509 (36%), Positives = 265/509 (52%), Gaps = 28/509 (5%)

Query: 41  FADL---APRLQEACIRAGWQSLMPVQAHALPYLFDGRDLMVQSRTGSGKTGAFLLPLLE 97
           FADL   AP +  A    G++   P+QA  +P+L  GRD++  ++TGSGKT AF LPLL 
Sbjct: 9   FADLGLSAPIIS-ALTDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSLPLLH 67

Query: 98  RLDPAEASTQALVLVPTRELALQVEHEARTLFEGT--GLRVAAVYGGVGYGKQNDALREG 155
            +D +  + Q LVL PTRELA+QV  EA T F     G+ V A+YGG  Y  Q  ALR+G
Sbjct: 68  NIDASLKAPQILVLAPTRELAVQVA-EAMTDFSKHMHGVNVVALYGGQRYDVQLRALRQG 126

Query: 156 AHFVVGTPGRVLDHLLRRTMQLDRLRALTFDEADRMLSIGFYPDMKEIQRYLPKRRIATC 215
              VVGTPGR+LDHL R T+ L  L  L  DEAD ML +GF  D++ I   +P     T 
Sbjct: 127 PQVVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLRMGFIEDVETIMAQIPAEH-QTA 185

Query: 216 LFSATYPPHVLNLAGEFLREPQMLSLSHSQVHVAQTQHMFCESKPMDKDRALIRLLEIEN 275
           LFSAT P  +  +   F+++PQ + +  S          +     + K+ AL+R LE E+
Sbjct: 186 LFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWSVYGLRKNEALVRFLEAED 245

Query: 276 PSSAIIFCNTKANVHYITAVLQGFGYNADELSADLSQSKREQVLERLRNNEVRFLVATDV 335
             +AIIF  TK     +   L+  GY++  L+ D++Q+ REQ LERL++  +  L+ATDV
Sbjct: 246 FDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQALREQTLERLKDGRLDILIATDV 305

Query: 336 AARGIDIPALSHVILYEPPEDRESYIHRAGRTGRAGAVGTVISLVDIMQKLELQRIARHY 395
           AARG+D+  +S V+ Y+ P D ESY+HR GRTGRAG  G  +  V+  ++  L+ I R  
Sbjct: 306 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTM 365

Query: 396 RMDIAHRPTPQDEDVARVVGDRLTALLEGAYRQCTGLQRERIQRFTDVARTLAADEEQVV 455
           ++ I     P     A V+G+R  A      +Q   L+   + ++  +   L   EE  V
Sbjct: 366 KLTIPEVEIP----TAEVLGERRLAKFAAKVQQ--QLESSDLDQYRALLAKLQPAEELDV 419

Query: 456 LLAMLLDEKYQQSLHAMPPRPRPQRASASRAVDSESDTAPRRRSRGRRDDEGSTGGDERK 515
                  E    +L  M    RP   +A    D    + P RR    R D G  G  +R+
Sbjct: 420 -------ETLAAALLKMAQGERPLIVAA----DPVFKSRPPRREFEERGDRGDRG--DRR 466

Query: 516 TAPRTAPSRTTAGAEGASAHEDTGAGNMQ 544
             P  +  R     + +   E   AG M+
Sbjct: 467 DRPVRSNDRPARDGD-SPRRERRDAGEME 494