Pairwise Alignments

Query, 577 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 507 a.a., DEAD/DEAH box helicase domain protein from Marinobacter adhaerens HP15

 Score =  251 bits (640), Expect = 6e-71
 Identities = 152/376 (40%), Positives = 212/376 (56%), Gaps = 8/376 (2%)

Query: 36  LPSVQFADLA--PRLQEACIRAGWQSLMPVQAHALPYLFDGRDLMVQSRTGSGKTGAFLL 93
           +  + FA+L   P + EA    G+++  P+QA A+P L  G  L+  ++TG+GKT AF L
Sbjct: 1   MSELSFAELGLDPAVLEAVSAVGYETPSPIQAQAIPALLAGNHLLGVAQTGTGKTAAFAL 60

Query: 94  PLLERLDPAEASTQALVLVPTRELALQVEHEARTLFEGT--GLRVAAVYGGVGYGKQNDA 151
           PLL R+D +    Q LVL PTRELA+QV  EA T +        V  +YGG  +  Q   
Sbjct: 61  PLLSRIDASVTDPQILVLAPTRELAIQVA-EAFTTYASKFRNFHVLPIYGGQDFYPQIKG 119

Query: 152 LREGAHFVVGTPGRVLDHLLRRTMQLDRLRALTFDEADRMLSIGFYPDMKEIQRYLPKRR 211
           LR GA  +VGTPGR+LDHL + T++LD L+AL  DEAD ML +GF  D++ I    P+  
Sbjct: 120 LRRGAQVIVGTPGRMLDHLRKGTLKLDSLKALVLDEADEMLRMGFIDDVEAILAKTPEN- 178

Query: 212 IATCLFSATYPPHVLNLAGEFLREPQMLSLSHSQVHVAQTQHMFCESKPMDKDRALIRLL 271
               LFSAT PP +  +A  +LR    + +      V +            K  AL R+L
Sbjct: 179 CQRALFSATMPPQIKKVAQTYLRNATEVRIESETRTVERISQFVLPVYAERKLDALTRIL 238

Query: 272 EIENPSSAIIFCNTKANVHYITAVLQGFGYNADELSADLSQSKREQVLERLRNNEVRFLV 331
           E+E   +AIIF  TKA    +   L   G+    LS DL+Q +REQ +E L+  +   ++
Sbjct: 239 EVEPIDAAIIFVRTKAETTMLAEKLSARGHAVAPLSGDLNQRQREQTVEDLKRGKKDIII 298

Query: 332 ATDVAARGIDIPALSHVILYEPPEDRESYIHRAGRTGRAGAVGTVISLVDIMQKLELQRI 391
           ATDVAARG+D+  ++HVI Y+ P D E+YIHR GRTGRAG  G  I LV   ++  L+ +
Sbjct: 299 ATDVAARGLDVSRITHVINYDVPYDTEAYIHRVGRTGRAGREGKAILLVTPRERSWLRTL 358

Query: 392 AR--HYRMDIAHRPTP 405
            R  +  M+    P+P
Sbjct: 359 ERATNSPMEAYELPSP 374