Pairwise Alignments

Query, 577 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 619 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  265 bits (678), Expect = 3e-75
 Identities = 165/461 (35%), Positives = 250/461 (54%), Gaps = 15/461 (3%)

Query: 44  LAPRLQEACIRAGWQSLMPVQAHALPYLFDGRDLMVQSRTGSGKTGAFLLPLLERLDPAE 103
           L+  L  A    G+++  P+Q+ ++  L  G+D++ Q++TG+GKTGAF LPLL ++  ++
Sbjct: 13  LSENLLRALDELGYENPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLNKVT-SQ 71

Query: 104 ASTQALVLVPTRELALQVEHEARTLFEGT-GLRVAAVYGGVGYGKQNDALREGAHFVVGT 162
           A  Q LVL PTRELA+QV     +  +   G  V  +YGG    +Q +AL+ G   +VGT
Sbjct: 72  AVPQILVLAPTRELAVQVAEAFSSYAKFMKGFHVLPIYGGQSMHQQLNALKRGPQVIVGT 131

Query: 163 PGRVLDHLLRRTMQLDRLRALTFDEADRMLSIGFYPDMKEIQRYLPKRRIATCLFSATYP 222
           PGRV+DH+ R T++L+ L+AL  DEAD ML +GF  D++ I  + P++R    LFSAT P
Sbjct: 132 PGRVMDHMRRGTLKLETLQALVLDEADEMLKMGFIDDIEWILEHTPEQR-QLALFSATMP 190

Query: 223 PHVLNLAGEFLREPQMLSLSHSQVHVAQTQHMFCESKPMDKDRALIRLLEIENPSSAIIF 282
             +  +A + L++   +S++ S   V   +  F +    +K  AL+R+LE+EN    IIF
Sbjct: 191 EQIKRVANKHLKDATNISIAASHTTVDSIEQRFVQVSQHNKLEALVRVLEVENTEGIIIF 250

Query: 283 CNTKANVHYITAVLQGFGYNADELSADLSQSKREQVLERLRNNEVRFLVATDVAARGIDI 342
             T+ +   +   L+  GY +  L  D++Q  RE+ +E+L++ ++  L+ATDVAARG+D+
Sbjct: 251 VRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVEQLKSGKLDILIATDVAARGLDV 310

Query: 343 PALSHVILYEPPEDRESYIHRAGRTGRAGAVGTVISLVDIMQKLELQRIARHYRMDIAHR 402
             + HV+ Y+ P D E+Y+HR GRTGRAG  G  I  V   +   L+ I R     I+  
Sbjct: 311 ERIGHVVNYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTIERATNSRISPM 370

Query: 403 PTPQDEDVARVVGDRLTALLEGAYRQCTGLQRERIQRFTDVARTLAADEEQVVLLAMLLD 462
             P  E VA     RL   L     Q     RE +     + + L  D +  +L A LL 
Sbjct: 371 KVPSPETVAERRLSRLGEQLAQTMTQDLDFMREAV---AQLCQQLEVDTD--LLAAALLH 425

Query: 463 EKYQQSLHAMPPRPRPQRASASRAVDSESDTAPRRRSRGRR 503
           +  Q+       RP    A   R  D  S+    R  RG R
Sbjct: 426 QVQQE-------RPLQLPAIQERTRDERSERGAERGERGER 459