Pairwise Alignments

Query, 603 a.a., methyl-accepting chemotaxis protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 806 a.a., methyl-accepting chemotaxis sensory transducer with Cache sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  238 bits (608), Expect = 6e-67
 Identities = 138/298 (46%), Positives = 195/298 (65%), Gaps = 3/298 (1%)

Query: 303 QADEARMKAAAATREGMLTAASRLEGVVKRINGATSDLERRAGDIDRGTDNQLARIGETA 362
           +A +  M+A       +   A R+  VV     A + L R+    +RG D Q AR GE A
Sbjct: 512 KAHQQEMEAKNTLISEVAVEADRISQVVAE---AAAGLARQVELAERGADVQKARAGEAA 568

Query: 363 TAMEEMNATVLEVARNAGRAAEQTDSSRAQAENGAEMVSRTVKAMEDLKQLATGLKDNMH 422
           +AM++MNA+V+EVAR A  AA   D +RA+AE+GA +   +V A   +   A  L+ +M 
Sbjct: 569 SAMDQMNASVVEVARAADEAAASADEARAKAEDGASITRESVAASTAVAADAEALRTDMR 628

Query: 423 RLGQQSEAIGHVMNVINDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMG 482
            LG Q E IG +M+VI+DIADQTNLLALNAAIEAARAG+AGRGFAVVADEVRKLAEKTMG
Sbjct: 629 ELGTQVEGIGRIMDVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMG 688

Query: 483 ATKEVGDSIRAIQGLARTNVDSMDEAVSAIDGAARLSSSSGDLLKEIVRTAHDAAGQVQA 542
           AT+EVG+++  I+  A  N+++ + A   +  +A L+ +SG  L+ IV  A   A +V+A
Sbjct: 689 ATREVGEAVTRIRAGAARNLEATENAARNVGRSAELAGASGQTLQHIVTIAVTTADRVRA 748

Query: 543 IVAAAEEQSAASEEITRSVEDINRIARDSGELIRAANNDIRDLAEQAEELHQLINALK 600
           I  AA +QSAASEEI+R+  +++RI+ ++ + +R A   +  LAEQAE L  ++  ++
Sbjct: 749 IATAASQQSAASEEISRATGEVDRISGETVDAMREAARAVAALAEQAEALRAVMARMR 806



 Score = 52.0 bits (123), Expect = 1e-10
 Identities = 66/275 (24%), Positives = 116/275 (42%), Gaps = 46/275 (16%)

Query: 241 AAQGVAAGNLDIRIVEQGRDEVAQLQKALNSMVATLRTNMDDIKAKEAEANRQADVARDA 300
           AA G+A     + + E+G D    +QKA     A+    MD + A   E  R AD   +A
Sbjct: 542 AAAGLAR---QVELAERGAD----VQKARAGEAASA---MDQMNASVVEVARAAD---EA 588

Query: 301 ARQADEARMKA---AAATREGMLTAASRLEGVVKRINGATSDLERRAGDIDRGTDNQLAR 357
           A  ADEAR KA   A+ TRE +  + +    V        +D+ R  G    G    +  
Sbjct: 589 AASADEARAKAEDGASITRESVAASTA----VAADAEALRTDM-RELGTQVEGIGRIMDV 643

Query: 358 IGETATAMEEMNATVLEVARNAGRAAEQTDSSRAQAENGAEMVSRTVKAMEDLKQLATGL 417
           I + A   ++ N   L  A  A RA +        A+   ++  +T+ A  ++ +  T +
Sbjct: 644 ISDIA---DQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMGATREVGEAVTRI 700

Query: 418 KDNMHR-----------LGQQSEAIG-------HVMNVINDIADQTNLLALNAAIEAARA 459
           +    R           +G+ +E  G       H++ +    AD+   +A  A+ ++A +
Sbjct: 701 RAGAARNLEATENAARNVGRSAELAGASGQTLQHIVTIAVTTADRVRAIATAASQQSAAS 760

Query: 460 GEAGRGFAVVADEVRKLAEKTMGATKEVGDSIRAI 494
            E  R       EV +++ +T+ A +E   ++ A+
Sbjct: 761 EEISR----ATGEVDRISGETVDAMREAARAVAAL 791