Pairwise Alignments

Query, 603 a.a., methyl-accepting chemotaxis protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  208 bits (529), Expect = 5e-58
 Identities = 170/610 (27%), Positives = 285/610 (46%), Gaps = 68/610 (11%)

Query: 2   LRNYSIATRVIALLVFMVLFVGGVMAAYHHTIDKVSGLGVEETQKVMLEQE-KMKLQVAT 60
           + N S+  +++ L +F ++    V+    + +++ S      T +  L  E K +++ AT
Sbjct: 1   MSNLSLRNKLLLLSLFPLILTLLVLMTVSYYVEQESLAEEVVTFRTKLVGERKQQIKEAT 60

Query: 61  HSASLALGELTAHLTDDEAKVAAIRKAIDGIRFEKDKSGYFFVYRGT-VNVALPTKKEVQ 119
             A+  + +    L D       + +A+  IRF    +GYFF+Y     N+       ++
Sbjct: 61  EIAA-GIVQYQLSLKDQ----GNVNQALRDIRF--GSAGYFFIYDSQGKNIFHALMPNLE 113

Query: 120 GKDLGGAKDKNNVFYVRELSQRAAQGGGFVEYVFDKPGKGDQ-PKLAYAEAIPGTDYWIG 178
           G++     D      +  L   A +G G   Y + KP   +Q  K++Y   +PGTD+ +G
Sbjct: 114 GQNKIDMTDPRGTKIIVGLLDAAKRGDGNFSYYYQKPNTNEQIEKISYVMMVPGTDWMLG 173

Query: 179 TGVYIDNIDATKTAISKDMGDVVADEVTRLFLIIAAVLVLGVIPLCVLIITG--IVRPLR 236
           TG YID+I+A      + + + +AD   + F+I+   LVL  I   ++++    +V P++
Sbjct: 174 TGAYIDDIEAVVEDYRQTVTEQMAD---KSFMILLIALVLTGITAFIIMVAAHRMVVPIK 230

Query: 237 EATGAAQGVAAGNLDI--RIVEQGRDEVAQLQKALNSMVATLRTNMDDIKAKEAEANRQA 294
               +   +A G  D+  R+  +G DE+AQL +A N  V  L+T + D+    A+    A
Sbjct: 231 NMADSLNDIAKGEGDLTKRLSVKGEDEIAQLGQAFNLFVDKLQTIIGDVANATAKVKSAA 290

Query: 295 DVARDAARQADEARMKAAAATREGMLTAASRLEGVVKRINGATSDLERRAGDIDRGTDNQ 354
           +   D  +                                  +S L     + D      
Sbjct: 291 NAIHDQTKVM--------------------------------SSQLLSHNNETD------ 312

Query: 355 LARIGETATAMEEMNATVLEVARNAGRAAEQTDSSRAQAENGAEMVSRTVKAMEDLKQLA 414
                +  TA+ EM++T  EVA+N  + AE T ++     N    V  +++ +  L    
Sbjct: 313 -----QVVTAITEMSSTASEVAQNTTQVAEATQAATGDVANAQRCVDASLEEIAGLMSQI 367

Query: 415 TGLKDNMHRLGQQSEAIGHVMNVINDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVR 474
                ++  L +QS+ I  V++VI  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR
Sbjct: 368 NNAAGSIKSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 427

Query: 475 KLAEKTMGATKEVGDSIRAIQGLARTNVDSMDEA----VSAIDGAARLSSSSGDLLKEIV 530
            LA +T  +T E+ + +  +  L    V +MDE+    V ++D +  +S S G  +   V
Sbjct: 428 NLASRTQASTLEINEMLSELHKLVSVAVKTMDESQQSCVRSVDSSRAISESLGS-VTSAV 486

Query: 531 RTAHDAAGQVQAIVAAAEEQSAASEEITRSVEDINRIARDSGELIRAANNDIRDLAEQAE 590
              +D + Q   I  AA EQS+ +EEI R+V  I  I  +       A    + ++++  
Sbjct: 487 TAINDMSTQ---IATAATEQSSVTEEINRNVYAIQEIVNELLHSSEDAAKVSQTVSQEGI 543

Query: 591 ELHQLINALK 600
            L +L+   K
Sbjct: 544 NLGKLVGQFK 553