Pairwise Alignments

Query, 327 a.a., radical SAM domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 335 a.a., Radical SAM (NCBI) from Rhodospirillum rubrum S1H

 Score = 50.8 bits (120), Expect = 5e-11
 Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 24/304 (7%)

Query: 7   PRVVNLELTNRCDMGCVFCDHAAMRGTMRMGD--MPPERLDAIVDQLLDALAGRRLPEIG 64
           P  +N+++T  C++ CV C H   + ++      + P   D +V+++ D   G R+  I 
Sbjct: 29  PSQINVDVTEVCNLACVHCPHPQFKKSVHYAGRMLDPALNDKMVEEVRDHGQG-RVGYIR 87

Query: 65  MVGLGEPMLNRHLETHLASLARIAPHCDRVTFNSNLVHLDDAKARLMLGSVATACTFSVN 124
               GEPM +  +   LA    +A     V+  +N + LD+ +   +L +       S++
Sbjct: 88  YTAAGEPMAHPAIFPMLAK--AVARSGTTVSLTTNGMLLDEGRRARLLETGIHLIDISID 145

Query: 125 APDREHYRRI-MGRDLFERVLANLTGFLE-VRRRLRPDFPVGVQIMEQQGGEVQKLTARI 182
           A   E Y R+ +G DL ERV   +   +E   RR+ P   + V  +EQ   + +  TA  
Sbjct: 146 AFLPETYARVRVGGDL-ERVRGGVLRLMEGAARRVDPP-KIVVSFVEQPFNQGE--TADF 201

Query: 183 PADLCEGVSFFV--RRLYSKPALVDHVAHSDTPDVRPFDVTEARYPCYELYSKVYIDIDG 240
                E  + +V  RRL+S        A  D       +  E R PC   + ++ ++  G
Sbjct: 202 ERFWKENGAAYVVIRRLHSCAG-----AAQDLAATLRVEQGETRRPCLYPWERIVLNPSG 256

Query: 241 NLYPCTIGNDCHRAGSGLHIGNVDETPVGALFNGAALAAAR-ARAEADALPFPECAACNI 299
            L  C           G  I    +T +  ++ G    A R A           C  C  
Sbjct: 257 QLSFCPAD-----WAHGAAIAEYRDTTIREVWQGPFYRALREAHLTNSYANHGFCGQCPD 311

Query: 300 WALT 303
           WA T
Sbjct: 312 WAST 315