Pairwise Alignments

Query, 453 a.a., polysaccharide biosynthesis protein/methyltransferase, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 245 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score = 60.5 bits (145), Expect = 6e-14
 Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 10/123 (8%)

Query: 1   MRVMAFVQARMGSTRLPGKSLMPVWNGMGVLEMTLRRALRARTLSGVVLCTSTDPACDAL 60
           M V   + AR GS+R PGK L P+ NG  +++    RA  A+ L+ + + T  +   DA+
Sbjct: 1   MNVTLLIPARYGSSRFPGKPLAPI-NGKPMIQHVYERAALAKGLNAIYVATDDERIKDAV 59

Query: 61  ETLASGL---GVQAFRGPE--DDVLTRYALATERFEPDAVVRICADSPLVCPEGIDALVA 115
           E+    +   G  A  G +  +D +T+  LA    + D V+ +  D PL+ P  I+ +V 
Sbjct: 60  ESFGGKVVMTGADAASGTDRIEDAITQLGLA----DDDLVINLQGDQPLIDPISIEQIVE 115

Query: 116 FFR 118
            FR
Sbjct: 116 LFR 118