Pairwise Alignments

Query, 349 a.a., sigma-54 dependent transcriptional regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 464 a.a., Flagellar regulatory protein FleQ from Pseudomonas fluorescens FW300-N2E2

 Score =  286 bits (732), Expect = 7e-82
 Identities = 159/332 (47%), Positives = 208/332 (62%), Gaps = 20/332 (6%)

Query: 17  QVFRMLGKVAPTDSTVLVTGESGTGKELLVRALHANSQRAQQPFVPINCGAIPKDLLESE 76
           Q+  +  +VA +DSTVL++GESGTGKE+L R +H  S+RA +PF+ INC AIP ++LE+ 
Sbjct: 138 QLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSRRASEPFIAINCAAIPDNMLEAT 197

Query: 77  LFGHEKGAFTHAIRSRPGRFELADGGTIFLDEIGEMDLMLQVKILRVLQEKEIERVGGTG 136
           LFGHEKG+FT AI ++PG+FE ADGGTI LDEI EM + LQ K+LRVLQE+E+ERVG   
Sbjct: 198 LFGHEKGSFTGAIAAQPGKFEQADGGTILLDEISEMPMGLQAKLLRVLQEREVERVGARK 257

Query: 137 TKKVDVRIVAATNRDLEREVAAGRFREDLYYRLNVIPLHLPPLRERGGDILVLAEHFLER 196
              +D+R+VA TNRDL  EVAAGRFREDLYYRL+V PL   PLRER  DIL LAE  L +
Sbjct: 258 PISLDIRVVATTNRDLASEVAAGRFREDLYYRLSVFPLAWRPLRERTADILPLAERLLNK 317

Query: 197 FCERKQRARLALAPDTRKVLAAYSWPGNIRELENFMERVSILAEGDIVDPADLPRKLLDE 256
              + + A   L+ + R  L AY WPGN+REL+N ++R  IL +G ++ P D        
Sbjct: 318 HVNKMKHAAARLSAEARACLVAYPWPGNVRELDNAIQRALILQQGGLIQPEDFCL----- 372

Query: 257 VGDIVTLPEPA--PVAPAAHAADVCRPAGGGFDWPTIADMRQRGMGLKDFLDTMEDRLLQ 314
            G +   P PA  PV  AA A             P++    +    L D L   E +++ 
Sbjct: 373 AGPVACAPLPALSPVPAAAFA-------------PSVEVEGESAGALGDDLRRREFQMII 419

Query: 315 EALAMAEGVKNQAAEILGIKRTTLIEKLKKKR 346
           + L    G + +AAE LGI   TL  KL + R
Sbjct: 420 DTLRAERGRRKEAAERLGISPRTLRYKLAQMR 451