Pairwise Alignments

Query, 349 a.a., sigma-54 dependent transcriptional regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 533 a.a., Transcriptional Regulator, NifA subfamily, Fis Family (NCBI) from Rhodospirillum rubrum S1H

 Score =  276 bits (705), Expect = 1e-78
 Identities = 153/337 (45%), Positives = 202/337 (59%), Gaps = 34/337 (10%)

Query: 8   IIGQSTTLCQVFRMLGKVAPTDSTVLVTGESGTGKELLVRALHANSQRAQQPFVPINCGA 67
           IIG S  + +V+ ++ KVA T +TVL+ GESG GKEL+  A+H N   A+ PF+  NC A
Sbjct: 220 IIGTSKPMQEVYDLIHKVAMTKATVLILGESGVGKELVASAIHYNGATAEGPFIKFNCAA 279

Query: 68  IPKDLLESELFGHEKGAFTHAIRSRPGRFELADGGTIFLDEIGEMDLMLQVKILRVLQEK 127
           +P+ L ESELFGHEKGAFT AI  R GRFE+ADGGTIFLDE+GE+ L +Q K+LRVLQEK
Sbjct: 280 LPESLGESELFGHEKGAFTGAIAQRKGRFEMADGGTIFLDEVGELSLAMQAKLLRVLQEK 339

Query: 128 EIERVGGTGTKKVDVRIVAATNRDLEREVAAGRFREDLYYRLNVIPLHLPPLRERGGDIL 187
             ERVGG  + +VDVRI+AATNR+L   V  G FREDL+YRLNV P+ LPPLR+RG D++
Sbjct: 340 TFERVGGGRSVRVDVRIIAATNRNLPEMVEKGTFREDLFYRLNVFPITLPPLRDRGSDVI 399

Query: 188 VLAEHFLERFCERKQRARLALAPDTRKVLAAYSWPGNIRELENFMERVSILAEGDIVDPA 247
           +L +HF+ R      R    ++     +L AY WPGN+RELEN +ER  IL+E  ++   
Sbjct: 400 LLVDHFIARHAAEGGREAKRVSTPALTMLMAYHWPGNVRELENVIERSVILSEDGVIHGY 459

Query: 248 DLPRKLLDEVGDIVTLPEPAPVAPAAHAADVCRPAGGGFDWPTIADMRQRGMGLKDFLDT 307
           +LP  L                             G  F           G GL+  L  
Sbjct: 460 NLPPSL-----------------------QTATETGTSF-----------GCGLEAKLQA 485

Query: 308 MEDRLLQEALAMAEGVKNQAAEILGIKRTTLIEKLKK 344
           +E  ++ EAL    G   +AA+ LG+ R  L  +++K
Sbjct: 486 VEYEMIVEALKTHGGNATEAAKELGLTRRILGLRMEK 522