Pairwise Alignments

Query, 275 a.a., cobalt ABC transporter, ATP-binding protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 259 a.a., octopine permease ATP-binding protein P from Phaeobacter inhibens DSM 17395

 Score = 85.9 bits (211), Expect = 8e-22
 Identities = 84/272 (30%), Positives = 117/272 (43%), Gaps = 28/272 (10%)

Query: 3   LSVRDLGFGYPGAERAALEGVTFSVPAGGLLCLCGVNGSGKSSLLSLLAGLQRPSTGGIR 62
           L +R L   Y   E   ++GV  +   G ++ L G +GSGKS+LL     L+    G I 
Sbjct: 8   LEIRGLHKSY--GELEVIKGVDITAHRGDVVSLIGSSGSGKSTLLRCCNLLEDSQEGDIL 65

Query: 63  LGGGPDAGSNGWPGDAPDAKDGDRREGLVAPSARQAREAARVLR--QGAALLLQD----A 116
             G P      W G            GL    AR+  +A +VLR     +++ Q     A
Sbjct: 66  FKGEPI----NWSGT-----------GL----ARRPSDAKQVLRIRTNLSMVFQQFNLWA 106

Query: 117 DMQILGATVGEDLCLALDPGDAEAHGAARDMADRFGLGHQWDEPVHTLSYGQKRKLCLAA 176
            M IL   V E     L    AE   AAR    + G+G + D     LS GQ+++  +A 
Sbjct: 107 HMTIL-QNVMEAPLTVLGRDRAEVEDAARKYLTKVGIGDKCDAYPAQLSGGQQQRAAIAR 165

Query: 177 ALLTGPHLLLLDEPFSGLDHPAIMELRAVLVAHRAAGLTQVVSVHDLEPVVDVADAMLVL 236
           AL   P  LL DEP S LD     E+  V+    A G T ++  HD+    DV+  ++ L
Sbjct: 166 ALCMEPEALLFDEPTSALDPELEQEVVKVIKDLAAEGRTMIIVTHDMNMAADVSSHIVFL 225

Query: 237 HEGRQVLYGPPCEVLDHVRDFGIRPPYSWTAH 268
           H+G     G P EV    R   +R   + T H
Sbjct: 226 HKGLIEEEGCPDEVFGSTRSERLRGFLASTRH 257