Pairwise Alignments

Query, 275 a.a., cobalt ABC transporter, ATP-binding protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 324 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 86/265 (32%), Positives = 124/265 (46%), Gaps = 52/265 (19%)

Query: 3   LSVRDLGFGYPGAERAALEGVTFSVPAGGLLCLCGVNGSGKSSLLSLLAGLQRPSTGGIR 62
           LSVRDL +     ERA L GV   +P G +L + G NG+GKSSLL  L     PS+G I+
Sbjct: 36  LSVRDLSWRC--GERAILSGVKLDLPEGKMLGIIGPNGAGKSSLLRCLYRFLTPSSGEIQ 93

Query: 63  LGGGPDAGSNGWPGDAPDAKDGDRREGLVAPSARQAREAARVLRQGAALLLQDADMQILG 122
           L G P A                               +AR   +  A++LQD   Q   
Sbjct: 94  LFGQPIASL-----------------------------SARAFAREVAVVLQDTP-QHFD 123

Query: 123 ATVGEDLCLALDPGDAEAHGAARDM---ADRF---------GLGHQWDEPVHTLSYGQKR 170
            T  + + L L P     H AA  M   ADR          GL  +  +   +LS G+K+
Sbjct: 124 MTTAQLVALGLTP-----HKAAFSMTTKADRLAVSQALETVGLKERAGQTYASLSGGEKQ 178

Query: 171 KLCLAAALLTGPHLLLLDEPFSGLDHPAIMELRAVLVAHRAAGLTQVVSVHDLEPVVDVA 230
           +  +A A+   P LL+LDEP + LD    +++  +L   +A G+T V+S+HDL     + 
Sbjct: 179 RALIARAIAQQPKLLILDEPTNHLDIRYQIQILELL---KALGVTVVISIHDLNLASALC 235

Query: 231 DAMLVLHEGRQVLYGPPCEVLDHVR 255
           D +L+L +G+ V  G P +VL   +
Sbjct: 236 DQLLLLDQGKAVAQGSPKQVLSEAQ 260