Pairwise Alignments

Query, 336 a.a., TRAP dicarboxylate family transporter (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 325 a.a., periplasmic C4-dicarboxylate transport protein from Sinorhizobium meliloti 1021

 Score =  148 bits (373), Expect = 2e-40
 Identities = 96/327 (29%), Positives = 171/327 (52%), Gaps = 9/327 (2%)

Query: 10  IAAIACIAMLAAGSYAEAAKRITIRLAHPMAPGNNVTL-GYEKFKEIVEAKSNGKVRIQL 68
           +  +A   ++AA     AA   T+  +    P    T+ G + F E+V+ ++ G+  +++
Sbjct: 4   LVKLAAGLLVAASFMGNAANAQTVLRSSDTHPDGYPTVEGVKYFGELVKERTAGRYSVEV 63

Query: 69  FGNCMLGSDRVTMEATQRGTLEMASSSSPNMTNFSKEMMVFDLPYITSPEHQEKLYKALD 128
           + +  LG ++ T+E  + G +E+   S        KE +V  LPY+   E  E ++K +D
Sbjct: 64  YHSAQLGEEKDTIEQVRSGVIELNRVSMAPFNGTVKESIVPALPYLFRSE--EHMHKVMD 121

Query: 129 EGALGERLDAIAAGIGLKPIMYSEYGYRNFATTKKPIKTADDLKNLKVRTTDSPIEVAVA 188
            GA+G+++     G G+  + + + G R+F   +KPI T +D+K LK R   S I V + 
Sbjct: 122 -GAIGDQIKKAFEGAGVVVLAFYDAGARSFYNKQKPINTVEDMKGLKFRVIQSDIFVDMV 180

Query: 189 SALGMNPTPVSWGETYTALQQGTVDGEGNTFGLLNDAKHTEVLRHAMDSAHNYSMHLLMI 248
           +ALG N TP+ +GE Y+ ++ G +DG  N F   + AKH EV ++     H     + ++
Sbjct: 181 AALGANATPMPYGEVYSGIETGVIDGAENNFPSYDTAKHFEVAKNYSLDEHTILPEVFVM 240

Query: 249 NKAYFDKLPADVQQILVDSGKEALAYQRAISNDLEKKAEQAFVERGIVITKLAPEERAKM 308
           NKA FDKL  + Q+I   + K+++A QR +     K++       G  IT   PE++  +
Sbjct: 241 NKAAFDKLTPEDQEIFKQAAKDSVAKQRELWAAKVKESRAKVEAAGAKIT--TPEKQGFI 298

Query: 309 RELTRPVWDKFSNDIPADLVKLVQETQ 335
            +  +PV++K   D    L K+V++ +
Sbjct: 299 -DAMKPVYEKHVTD--EVLKKMVEDVR 322