Pairwise Alignments

Query, 336 a.a., TRAP dicarboxylate family transporter (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 325 a.a., C4-dicarboxylate transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 77/323 (23%), Positives = 136/323 (42%), Gaps = 22/323 (6%)

Query: 9   AIAAIACIAMLAAGSYAEAAKRITIRLAHPMAPGNNVTLGYEKFKEIVEAKSNGKVRIQL 68
           A AA+A ++     +  E + R +    +P  P   +    + + E V  +S G++ I +
Sbjct: 6   AAAAMAALSFCGIANAQEYSLRFSTSQVNPNEP---IIKAMKTYAERVGERSGGRIAITV 62

Query: 69  FGNCMLGSDRVTMEATQRGTLEMASSSSPNMTNFSKEMMVFDLPYI------TSPEHQEK 122
                LG+ +   E    G   ++++    +  F  ++ +   PY+      T       
Sbjct: 63  MTGDQLGAQKKVNEMVMSGASLLSATDYGQLGQFVPDLSILAGPYVYPDLAATDRLFASD 122

Query: 123 LYKALDEGALGERLDAIAAGIGLKPIMYSE-YGYRNFATTKKPIKTADDLKNLKVRTTDS 181
           LYK L  G L  R        G+K IM +  +GYR+    K P+++  DL  + +R   S
Sbjct: 123 LYKDLS-GKLEAR--------GIKIIMPNGLFGYRHIIANK-PVRSPADLAGVTIRVPSS 172

Query: 182 PIEVAVASALGMNPTPVSWGETYTALQQGTVDGEGNTFGLLNDAKHTEVLRHAMDSAHNY 241
           PI +A     G  PT + WG+ Y ALQ G VD     FG +  AK  E  +    + H  
Sbjct: 173 PIMMATFGNYGARPTELPWGDVYNALQTGVVDAAEGPFGSIAGAKLNETRKVISKTGHQI 232

Query: 242 SMHLLMINKAYFDKLPADVQQILVDSGKEALAYQRAISNDLEKKAEQAFVERGIVITKLA 301
                + +  +F+ LP D+Q IL++ G+        ++ + +    +     G+ I  + 
Sbjct: 233 MFTAWVASSQFFNSLPEDLQTILLEEGQTIAKELTQMTLETDDAYAKQLAASGVEI--VT 290

Query: 302 PEERAKMRELTRPVWDKFSNDIP 324
             +     E +R  ++K  N  P
Sbjct: 291 DVDIPSFIEASRAAYEKVPNITP 313