Pairwise Alignments

Query, 336 a.a., TRAP dicarboxylate family transporter (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 324 a.a., substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 90.9 bits (224), Expect = 4e-23
 Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 11/251 (4%)

Query: 54  EIVEAKSNGKVRIQLFGNCMLGSDRVTMEATQRGTLEMASSSSPNMTNFSKEMMVFDLPY 113
           E +  ++ G+ +I +F    LG +    +  + GT+++  S S         + V   PY
Sbjct: 49  EEIAKRTEGRYKIDVFPASQLGKEADINQGLKLGTVDIIISGSSFAARDHAPIGVTYFPY 108

Query: 114 I-TSPEHQEKLYKALDEGALGERLDA---IAAGIGLKPIMYSEYGYRNFATTKKPIKTAD 169
           I   P H      A  +  + +RL A    A+G  +  + Y  YG R+  T+ +PI    
Sbjct: 109 IFRDPAHMI----AYTKSDVFKRLAAGYEEASGNHITAVTY--YGTRH-TTSNRPIAKCA 161

Query: 170 DLKNLKVRTTDSPIEVAVASALGMNPTPVSWGETYTALQQGTVDGEGNTFGLLNDAKHTE 229
           D++ LK+R  D P  +A+  A G N TP+++ E Y ALQ GTV+ + N    +   K  E
Sbjct: 162 DMQGLKMRVPDVPAYLAMPRACGANTTPIAFAEVYLALQNGTVEAQENPLTTIEAKKFFE 221

Query: 230 VLRHAMDSAHNYSMHLLMINKAYFDKLPADVQQILVDSGKEALAYQRAISNDLEKKAEQA 289
           V +H + + H       +++K  + +L    +QI  +  +EA      I  + EK+    
Sbjct: 222 VQKHIVLTGHIVDHLNTVVSKNLWSQLSDADKQIFTEVMQEAAVRATKIIEEREKELVAT 281

Query: 290 FVERGIVITKL 300
           F ERGI +T++
Sbjct: 282 FKERGIEVTEV 292