Pairwise Alignments

Query, 336 a.a., TRAP dicarboxylate family transporter (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 338 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  177 bits (450), Expect = 3e-49
 Identities = 103/315 (32%), Positives = 174/315 (55%), Gaps = 5/315 (1%)

Query: 16  IAMLAAGSYAEAAKRITIRLAHPMAPGNNVTLGYEKFKEIVEAKSNGKVRIQLFGNCMLG 75
           +A++ AG      +  T++ A     G+    G EKF E+V+ KS GK+ ++LF    LG
Sbjct: 16  LALMTAGPALAEIRDQTVKFASANNKGHPQVTGMEKFAELVKEKSGGKIEVKLFPGGTLG 75

Query: 76  SDRVTMEATQRGTLEMASSSSPNMTNFSKEMMVFDLPYI-TSPEHQEKLYKALDEGALGE 134
            D  T+ A Q G +EM   ++  + +  KE    DLP++  S E  +K+       +L E
Sbjct: 76  GDVQTVSALQGGVIEMTVLNAGILASNVKEFGAVDLPFLFDSGEEADKVMDGPFGTSLME 135

Query: 135 RLDAIAAGIGLKPIMYSEYGYRNFATTKKPIKTADDLKNLKVRTTDSPIEVAVASALGMN 194
           RL A     GL  + Y E G+RN    + P+   +D+K LK+RT  SPI V + +ALG N
Sbjct: 136 RLPAT----GLVGVAYWELGFRNLTNNRHPVTKLEDIKGLKIRTIQSPIPVELFNALGAN 191

Query: 195 PTPVSWGETYTALQQGTVDGEGNTFGLLNDAKHTEVLRHAMDSAHNYSMHLLMINKAYFD 254
             P+ + E YTAL+ GTVDG+ N    + +AK  EV ++   + H Y+  +++++K ++D
Sbjct: 192 AVPLPYTELYTALETGTVDGQENPSANIINAKFYEVQKYMTLTRHQYNPQIVLVSKKFWD 251

Query: 255 KLPADVQQILVDSGKEALAYQRAISNDLEKKAEQAFVERGIVITKLAPEERAKMRELTRP 314
            L  + + +L  +  EA  +QR +S + +  A +   + G+ +++L+ EE  K+R+  +P
Sbjct: 252 GLNDEEKTVLQQAAVEARDFQRKVSREQDAAALEEIRKTGMEVSELSAEETQKLRDAVKP 311

Query: 315 VWDKFSNDIPADLVK 329
           + +KFS DI  + V+
Sbjct: 312 MIEKFSADIGQETVE 326