Pairwise Alignments

Query, 321 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 291 a.a., preprotein translocase subunit Tim44 from Vibrio cholerae E7946 ATCC 55056

 Score =  117 bits (294), Expect = 3e-31
 Identities = 85/298 (28%), Positives = 152/298 (51%), Gaps = 31/298 (10%)

Query: 29  LCMSPLADAKRMGGGGSFGSRPSMQRSFTPTPQQAPQMQRQQTPTQQGINQQNPGAAQQP 88
           + ++P+A+AK+ GGG SFG+      S+   P  AP+ Q+Q+  T +  +  NP ++ + 
Sbjct: 15  VAVTPIAEAKKFGGGKSFGNN-----SYKTAP--APKQQQQKNDTVKN-DAANPASSAKK 66

Query: 89  GMAQQPRRGLFGGMGGFLGGMLAGGLLGSLFFGGGFGGMPGILDMLLLALVAYGIFK--- 145
           G+           MGG LGG+LAGGLL + FFGG F G+   +D+L++ L+A+ IFK   
Sbjct: 67  GL-----------MGGLLGGLLAGGLLAA-FFGGAFEGIQ-FMDILIMGLIAFVIFKLMR 113

Query: 146 -FISMRRQAANP---QPAAAGYGAHTSPSDNDNGWGTLRSAPQG-GTTYQEQAGPEVPAG 200
            F++ ++ + N    QPA +G         N + +   +S   G G+  Q       PAG
Sbjct: 114 AFLASKQGSINQSQQQPAYSGMNRTPFEQPNVHNFEQPQSMGGGFGSAAQSDVPHNYPAG 173

Query: 201 FDIEQFIKGAKMAFTRLQASWDKRDLEDISQFSTPAVLDEIRRQAEADPVPSTTEILLVN 260
           FD   F+ GA+  +  LQ +W+   LE I ++ +P++ ++++ +         T+++ V+
Sbjct: 174 FDRVAFVNGAREHYRILQGAWNHNQLETIREYVSPSLFEDLKAERANYEGDQHTDVMYVD 233

Query: 261 ANLLGVVEENGQQTATVFFDVLLREDPRQDAPTSVREVWHFVRPVK-GTGMWQLDGIQ 317
           A ++    +  +   ++ F    R D  +    ++ +VWH  R +      W + GIQ
Sbjct: 234 AEIVRADYDANRAQLSLQFSGRYR-DAVEGIEENIEDVWHLERDLTVPNAPWLIVGIQ 290