Pairwise Alignments

Query, 255 a.a., high-affinity branched chain amino acid ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 270 a.a., ABC transporter related (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  229 bits (583), Expect = 6e-65
 Identities = 117/258 (45%), Positives = 178/258 (68%), Gaps = 5/258 (1%)

Query: 2   ALLEIKGLTQRFGGLQAVSDFNIELEAGELAGLIGPNGAGKTTVFNLTSGFYTPTEGSIT 61
           A+L+++ ++  FGGL+A+++ ++++  GE+  LIGPNGAGKTT FN  +G Y PTEG++ 
Sbjct: 11  AVLDVRSISMNFGGLRALNEVDLQVRQGEIVALIGPNGAGKTTFFNCITGIYVPTEGTVH 70

Query: 62  F---DG--TPTRGLRPHQVTALGIARTFQNIRLWHDLSVLDNIRIAQHHRLGYTLWDAFL 116
               DG      GL+  QVTALG++RTFQNIRL+  +SVL+N+ I +H R    +  A L
Sbjct: 71  VTPRDGRTVTVNGLKASQVTALGMSRTFQNIRLFPTMSVLENVMIGRHCRTRAGILGALL 130

Query: 117 RTRRYTAGEKAIDAIAWEMLEAMDLKEYANEVPRNLPYGMQRRVEIARAMSMKPKLLLLD 176
           R  +  A E+ I   ++ +L++++L ++  +  RNLPYG QRR+EIARA++ +P LL LD
Sbjct: 131 RDPKTRAEEQRIVEESYALLKSVNLHQHYKDEARNLPYGAQRRLEIARALATEPFLLCLD 190

Query: 177 EPAAGLNSVDVDGLIRLIRWIHDEFDITIWMIEHQMKVVMSLCQRIKVIDFGSTIADGTP 236
           EPAAG+N  +   L  L+  I +  ++++ +IEH M +VMSL  RI V+++GS IA+GTP
Sbjct: 191 EPAAGMNPQETHELKELVIEIRERHELSVLLIEHDMSMVMSLSDRIYVMEYGSKIAEGTP 250

Query: 237 ETIQTNPVVIKAYLGDDT 254
           E +  NP VIKAYLG+++
Sbjct: 251 EEVSKNPRVIKAYLGEES 268