Pairwise Alignments

Query, 241 a.a., high-affinity branched-chain amino acid ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 243 a.a., amino acid ABC transporter ATPase from Herbaspirillum seropedicae SmR1

 Score =  219 bits (559), Expect = 3e-62
 Identities = 115/240 (47%), Positives = 162/240 (67%), Gaps = 6/240 (2%)

Query: 2   LLSIDNLKVRYGNIEALHGLTFHVNEGEIVTLIGANGAGKSTTLKSIMRLPPPEAPRVSA 61
           +L +++L V YG+IEA+ G++  +NEGEI  L+GANGAGKST+L +I  L      +   
Sbjct: 10  ILQVEDLAVAYGHIEAVKGISLSLNEGEITALVGANGAGKSTSLLAISGLV-----KAQR 64

Query: 62  GDITYKGQSLLNVEPHDVVRKLRIALVPEGRHIFGNLSVMENLMLATYSRGSDPAIGKDL 121
           G +   GQ LL + PH +V    +  V EGR     L+V ENL L  Y+R     + +DL
Sbjct: 65  GRVLLHGQDLLQMSPHRIVES-GVVQVAEGRATLTTLTVEENLGLGAYTRKDKDGVARDL 123

Query: 122 DRIFDLFPRLAERRDQRSDTLSGGEQQMLAVGRALMTNCELLLLDEPSMGLAPLLMYEMF 181
           + ++ LFP L  R    +  LSGGEQQMLA+GRALM   ++LLLDEPSMGLAPL++ E+F
Sbjct: 124 EWVYSLFPVLKNRAAGLAGNLSGGEQQMLAIGRALMAKPKVLLLDEPSMGLAPLIIQEIF 183

Query: 182 RTLKQLNREGLTIVVVEQNARLALQVADRGYVLDTGEIVAEGSSEQLASDPEVKKAYLGG 241
           R ++++N+ G+T+++VEQN R AL++A RGYVL+TG+IV E S   L  +P+V +AYLGG
Sbjct: 184 RIVQEINKTGMTVLLVEQNVRQALRIAQRGYVLETGKIVLEDSGANLLGNPKVVEAYLGG 243