Pairwise Alignments

Query, 241 a.a., high-affinity branched-chain amino acid ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 241 a.a., amino acid ABC transporter ATPase from Herbaspirillum seropedicae SmR1

 Score =  231 bits (588), Expect = 1e-65
 Identities = 119/239 (49%), Positives = 171/239 (71%), Gaps = 4/239 (1%)

Query: 2   LLSIDNLKVRYGNIEALHGLTFHVNEGEIVTLIGANGAGKSTTLKSIMRLPPPEAPRVSA 61
           +L +  L V YG I+A+ G+   VNEGE+VTLIGANGAGK+TTLK+I    P  A RV  
Sbjct: 5   ILKVQQLSVAYGGIQAVKGIDLEVNEGELVTLIGANGAGKTTTLKAITGTLP--ASRVE- 61

Query: 62  GDITYKGQSLLNVEPHDVVRKLRIALVPEGRHIFGNLSVMENLMLATYSRGSDPAIGKDL 121
           G I Y GQ L   +  ++V+  ++A+VPEGR +F  +S+ ENL++  Y+      I  D+
Sbjct: 62  GHIEYLGQPLKGKKSFELVKD-KLAMVPEGRGVFTRMSIQENLLMGAYTSDDKGQIAADI 120

Query: 122 DRIFDLFPRLAERRDQRSDTLSGGEQQMLAVGRALMTNCELLLLDEPSMGLAPLLMYEMF 181
           D+ F +FPRL ER  Q + TLSGGEQQMLA+ RALM++ +LLLLDEPSMGL+P+++ ++F
Sbjct: 121 DKWFAVFPRLKERAAQMAGTLSGGEQQMLAMARALMSHPKLLLLDEPSMGLSPIMVEKIF 180

Query: 182 RTLKQLNREGLTIVVVEQNARLALQVADRGYVLDTGEIVAEGSSEQLASDPEVKKAYLG 240
             ++ ++ +G+TI++VEQNA+LAL+ A RGYV+++G I  +G ++Q+  DP VK AYLG
Sbjct: 181 EVIRNVSAQGITILLVEQNAKLALEAAHRGYVMESGLITMQGQAQQMLDDPRVKAAYLG 239