Pairwise Alignments

Query, 254 a.a., RNA methyltransferase, TrmH family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 234 a.a., TrmJ/YjtD family RNA methyltransferase from Methanococcus maripaludis S2

 Score = 61.2 bits (147), Expect = 2e-14
 Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 7/161 (4%)

Query: 7   VVMVKTRFPENVGMVARACVNMGAQDIVLVDPERWEIDKARPLATAKGEPLLERVKVVGT 66
           V++V  ++  N+G +AR  +N   +++ +V       D+A  +     + +L   K    
Sbjct: 5   VILVNPKYGGNLGAIARNMMNFDVEELRIVGTPEILDDEAY-IRAVHAKNILNNAKFYSK 63

Query: 67  LSEAVADCTAVWGTTARTGGWR---REILTPEKAGPEMAASLADGERVALLLGPEDRGLN 123
           L +A++D      TT    G R   R  +TP +   + ++       + ++ G ED GL 
Sbjct: 64  LEDAISDIDFTVATTGAVCGDRNVNRVPITPRELAKKHSSISGT---LGIVFGREDDGLK 120

Query: 124 NDEIEHCTRLLTIPTAPEASSLNVAQASLIVLYECHKASLA 164
           N+++E C  L+++PT+ +   LN++ A  ++LYE +  S +
Sbjct: 121 NEDVELCDILVSVPTSNKYPILNLSHAVSVILYEIYFESFS 161