Pairwise Alignments

Query, 441 a.a., D-alanyl-D-alanine carboxypeptidase family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 500 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  176 bits (447), Expect = 1e-48
 Identities = 119/385 (30%), Positives = 197/385 (51%), Gaps = 25/385 (6%)

Query: 44  SAFLIDQNSRRVLFEQNADAQIPPASLTKVISMYVALDHIRAGKASLADKVKISARAART 103
           +  ++D  + +VL+ ++AD    PASLTK++++Y+  + + AG+ S +  V  S +A+  
Sbjct: 53  AGIVVDAKTGKVLYGEDADQLRYPASLTKMMTLYLTFEALEAGRISKSTPVPFSKKASAE 112

Query: 104 GGSRMFLTRGETVSLDELLMGMAVSSGNDASVAVAEHIAGSTDRFVQLMNAKARALGMTE 163
             S++ +  G ++++++ ++ +   S NDA+ A+ E + GS  RF ++M  KARALGMT 
Sbjct: 113 PPSKLGVRAGRSITVEQAILSLVTRSANDAATALGELLGGSEQRFARMMTNKARALGMTR 172

Query: 164 TTFRNVNGLPAAGQKTTARDMGKLAVSYLTAHPQALRYHSTRFIRHNKVITTNKNPMLGN 223
           TT+RN +GLP + Q+TTARD  +L ++     PQ   Y STR  R  K    N N +LGN
Sbjct: 173 TTYRNAHGLPNSEQRTTARDQARLGIALRQHFPQYYDYFSTRSFRFGKQTIGNHNRLLGN 232

Query: 224 CEGADGLKTGWVCASGYNLISTVKRGNTRLVAVVLGAENSQVRGQEMNRLIDAGY---RS 280
             G DG+KTG+  ASG+NL+++ +     +VAVV+G  +   R  +M +L+ A Y    S
Sbjct: 233 VRGVDGIKTGYTRASGFNLVTSAQLDGRSIVAVVMGGTSGGARDAQMRKLV-AKYMPSAS 291

Query: 281 LRGEGPSVAAVLPRLSPADYRIDLHKTNSLAYAEVSKHKKKIAARKGKLRAGKTGSKQHA 340
            RG G  +A V     PA+         ++A AEV       A     +    TG     
Sbjct: 292 RRGSGNLIAEV-----PAE------PVTTVAEAEVPP-ATAAAVASAAMDLPNTGPVPDF 339

Query: 341 SAQVSKSSKSSKAVKGKSPDKSAATSKAVATVRREKAKAVPSNKSVRATKVQQARKAAVA 400
                 ++  + A     P   A+ +  +A      AK  P+    +  ++ Q  +AA  
Sbjct: 340 RYTGESAAGVAMAYASTKP---ASDNPVLA------AKIAPNTLDSQIARLAQEPEAAGD 390

Query: 401 RKTETKTTVKRSKPATAASTKKTAA 425
             T+   +V  ++ A AA+   T A
Sbjct: 391 VDTQITNSVATAETAPAAAEASTEA 415