Pairwise Alignments

Query, 441 a.a., D-alanyl-D-alanine carboxypeptidase family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 390 a.a., D-alanyl-D-alanine carboxypeptidase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  161 bits (408), Expect = 3e-44
 Identities = 89/237 (37%), Positives = 140/237 (59%), Gaps = 4/237 (1%)

Query: 47  LIDQNSRRVLFEQNADAQIPPASLTKVISMYVALDHIRAGKASLADKVKISARAAR---T 103
           L+D  S +++ E+NA   + PASLTK+++ YV    I+AG  S  D V IS  A     +
Sbjct: 42  LMDYYSGQIIAEENAYESLNPASLTKMMTSYVIGQEIKAGNVSPDDDVTISKNAWSKNFS 101

Query: 104 GGSRMFLTRGETVSLDELLMGMAVSSGNDASVAVAEHIAGSTDRFVQLMNAKARALGMTE 163
             S+MF+  G+TV + +L  G+ + SGNDA VA+AEHIAG+   FV +MN+ ++ LGM +
Sbjct: 102 DSSKMFIEVGKTVKVSDLNRGIIIQSGNDACVAMAEHIAGTEGAFVDMMNSWSKQLGMRD 161

Query: 164 TTFRNVNGLPAAGQKTTARDMGKLAVSYLTAHPQALRYHSTRFIRHNKVITTNKNPML-G 222
           + F N +GL +   KTTA DM  L  + +   P+  R +S ++   N +   N+N +L  
Sbjct: 162 SYFENSHGLDSENHKTTAYDMALLGAALIRDVPEEYRIYSEKYYTFNGIKQYNRNGLLWD 221

Query: 223 NCEGADGLKTGWVCASGYNLISTVKRGNTRLVAVVLGAENSQVRGQEMNRLIDAGYR 279
           N    DG+KTG    +GYNL+++  +   RL++VV+G ++   R  E  +L+  G+R
Sbjct: 222 NSMNVDGIKTGHTSGAGYNLVASATKDGMRLISVVMGTQSEAARKAESKKLLTYGFR 278