Pairwise Alignments

Query, 243 a.a., chemotaxis MotB protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 393 a.a., Flagellar motor rotation protein MotB from Xanthomonas campestris pv. campestris strain 8004

 Score = 87.8 bits (216), Expect = 3e-22
 Identities = 75/257 (29%), Positives = 115/257 (44%), Gaps = 51/257 (19%)

Query: 2   GGGKGGGSWKVAYADFVTAMMAFFLLMWILNMTSKETKEGLAGYFSSDA-AKMQSNNVSP 60
           GGG  GG+WKVA+ADFVTAMMAFFL++W++  T+KE +  ++ YF + +    +S   SP
Sbjct: 18  GGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYFRNPSPLSGKSPAPSP 77

Query: 61  VANNPFVQSTDKL------------------------DTRDFKITEVERSHYAIAQKLRQ 96
             N P   ST  +                        DT      + ++   A+ Q L++
Sbjct: 78  GMNGPGGASTSMIKLGGTADMAKGQKDEMGRKRDNAADTDVDSRAKDKKRLEALMQDLKE 137

Query: 97  -------------MLMADATPQSASGISADDVGVQLRVNSDIMYAPGSAELAPEGAKVLD 143
                         L+ D TP    G+    V  Q R   DI    G  +L P    +L 
Sbjct: 138 AIDKSQALEPFKDQLLLDLTP---DGLRIQIVDKQNRPMFDI----GRDQLKPYTVDILR 190

Query: 144 DVIRILKEYNLYLVVRGHTDSGEPRNSIYPSNWELSGARAAAAVRYIITHG--EIKPTRL 201
           ++   + +   ++ + GHTD+    +    +NWELS  RA AA R ++  G  + K TR+
Sbjct: 191 ELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVGGGMADAKVTRV 250

Query: 202 ----RSIAYADTRPLEP 214
                S+ +  T P  P
Sbjct: 251 VGLSSSVLFDKTNPQNP 267