Pairwise Alignments

Query, 243 a.a., chemotaxis MotB protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 324 a.a., Flagellar motor rotation protein MotB from Xanthomonas campestris pv. campestris strain 8004

 Score = 87.4 bits (215), Expect = 3e-22
 Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 37/254 (14%)

Query: 9   SWKVAYADFVTAMMAFFLLMWILNMTSKETKEGLA-------GYFSSDAAKMQSNNVSPV 61
           +W + YAD +T ++AFF++M+ ++  ++   + +A       G  S  A+ +Q  N   +
Sbjct: 16  AWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTTAFGGSSKAASPVQLGNTQSL 75

Query: 62  -----------ANNPFVQSTDKLD-----------------TRDFKITEVERSHYAIAQK 93
                      A  P   S    D                     ++   +R   A+AQ+
Sbjct: 76  GADYDRPSVIKAGAPMAASNGPTDPTILPSMAAQMRMPVSLRNQAQLARAQRQMDAVAQQ 135

Query: 94  LRQMLMADATPQSASGISADDVGVQLRVNSDIMYAPGSAELAPEGAKVLDDVIRILKEYN 153
           L + L      Q  + I   D+ +++ +NSDI++  GSA LA      L  +  +L++  
Sbjct: 136 LNKTLSPLIDKQLIT-IRRRDLWIEVEINSDILFVTGSALLAGSARGTLSTLAAVLRDAP 194

Query: 154 LYLVVRGHTDSGEPRNSIYPSNWELSGARAAAAVRYIITHGEIKPTRLRSIAYADTRPLE 213
             + V G+TD+     + +PSNWELS ARAA+ V      G + P RL  + Y + R   
Sbjct: 195 NGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADEG-VAPQRLAMVGYGEFRARA 253

Query: 214 PNTSPDSRAKNRRV 227
            N++   R  NRRV
Sbjct: 254 DNSTEAGRNANRRV 267