Pairwise Alignments

Query, 243 a.a., chemotaxis MotB protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 289 a.a., Flagellar motor protein from Sphingomonas koreensis DSMZ 15582

 Score = 80.9 bits (198), Expect = 3e-20
 Identities = 75/251 (29%), Positives = 118/251 (47%), Gaps = 37/251 (14%)

Query: 7   GGSWKVAYADFVTAMMAFFLLMWILNMTSKETKEGLAGYFSSDAAK-------------- 52
           GG+WKVAYADFVTAMMAFF+L+W+L   +K   +GLA YFS  ++K              
Sbjct: 27  GGAWKVAYADFVTAMMAFFMLLWLLANPNKAQLKGLADYFSPVSSKESPASTMTQLPGAQ 86

Query: 53  ---------MQSNNVSPVANNPFVQSTDKLDTRDFKITEVERSHYAIAQKLRQML---MA 100
                     Q+ +  PV   P  ++  K   R       E +   +A+++R  +   +A
Sbjct: 87  PGLGGHARHAQAADREPVGQ-PSAEAGVKGAARGGTAQVPEAALRVLAEEMRLSIEPPVA 145

Query: 101 DATPQSASGISADDVGVQLRVNSDI---MYAPGSAELAPEGAKVLDDVIRILKEYNLYLV 157
            A  + +  I     G+++ +       M+   +A+L     ++L  V R L      + 
Sbjct: 146 AADGKRSVNIERSREGLRIHLVDTANRSMFRGSTAQLNDFAREMLARVARRLAGTKAQVA 205

Query: 158 VRGHTDSGEPRNSIYPSNWELSGARAAAAVRYIITHGEIKPTRL-RSIAYADTRPLEPNT 216
           + GHTDS   ++    +NW LS  RA AA   ++  G + P R    +A A T P+ P+ 
Sbjct: 206 IEGHTDSTGGQSD---ANWLLSAQRALAARSAMVAAG-LTPDRFGEVVAKAGTEPVYPD- 260

Query: 217 SPDSRAKNRRV 227
            PD   +NRR+
Sbjct: 261 RPD-LPENRRI 270