Pairwise Alignments

Query, 243 a.a., chemotaxis MotB protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 329 a.a., flagellar motor protein MotB from Burkholderia phytofirmans PsJN

 Score = 98.6 bits (244), Expect = 1e-25
 Identities = 81/256 (31%), Positives = 121/256 (47%), Gaps = 36/256 (14%)

Query: 3   GGKGGGSWKVAYADFVTAMMAFFLLMWILNMTSKETKEGLAGYFSSDAAKMQSNNVSPVA 62
           G   GG+WK+AYADFVTAMMAFFLLMW+L  TSK  K+G+  YF++  + +   N    A
Sbjct: 30  GAHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKFDKQGIEDYFNTPLSSLLGGNEGTTA 89

Query: 63  NNPFVQS---TDKLDTRDF--KITEVERSHYAI---------AQKLRQM-----LMADAT 103
             P V      D  DTR    K ++ E +  A+         A +L Q+      + + +
Sbjct: 90  ARPSVVQGGGRDISDTRPAVGKKSQSEPTPPAVTTPSVAPSDATRLEQLKAKLTALIEQS 149

Query: 104 P-----QSASGISADDVGVQLRV---NSDIMYAPGSAELAPEGAKVLDDVIRILKEYNLY 155
           P     +    IS  + G+++ +    +  M+  GS++L P    +L  +   L + +  
Sbjct: 150 PILKAFKDQIRISITNEGLRIEIVDSQNRPMFPSGSSKLQPYAVTILTQIGAALNDVDNR 209

Query: 156 LVVRGHTDS----GEPRNSIYPSNWELSGARAAAAVRYIITHGEIKPTRLRSIAYADTRP 211
           + + GHTD+      P      SNWELS  RA AA R ++  G      L+    AD  P
Sbjct: 210 VSIAGHTDAVPYTAGPEGY---SNWELSSERANAARRSLVAGGMHGEKLLQVRGLADVLP 266

Query: 212 LEPNTSPDSRAKNRRV 227
           L  N+       NRR+
Sbjct: 267 L--NSQVADEPTNRRI 280