Pairwise Alignments

Query, 243 a.a., chemotaxis MotB protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 335 a.a., flagellar motor protein MotB from Burkholderia phytofirmans PsJN

 Score = 82.0 bits (201), Expect = 1e-20
 Identities = 76/263 (28%), Positives = 113/263 (42%), Gaps = 41/263 (15%)

Query: 4   GKGGGSWKVAYADFVTAMMAFFLLMWILNMTSKETKEGLAGYFS---------------- 47
           G  GG+WK+AYADF+TAMMAFFLLMW+L+  S    +G+A YF+                
Sbjct: 20  GHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADYFNQPLKITLWGGDRSAED 79

Query: 48  SDAAKMQSNNVSPVANNPFVQSTDKLDTRDFKIT------------EVERSHYAIAQKLR 95
           S   K    ++S  A      S    +  +                E+ER        L+
Sbjct: 80  SSILKGGGRDISTDAQGVTRSSEGSNNRAEHSAAHGSEDSIKQLQGELERREQVRLHDLQ 139

Query: 96  QMLMA--DATP---QSASGISADDVGVQLRV-----NSDIMYAPGSAELAPEGAKVLDDV 145
             LMA  +A P   Q    I  D     LR+         M+A    ++ P    +L ++
Sbjct: 140 VKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATAKDQVEPYMRDILREI 199

Query: 146 IRILKEYNLYLVVRGHTDSGEPRNSIYP-SNWELSGARAAAAVRYIITHGEIKPTRLRSI 204
              L +    ++V+GHTD+ +        SNWELS  RA A+ R +I  G  +   +R +
Sbjct: 200 GHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRANASRRELIGGGMDEAKVMRVL 259

Query: 205 AYADTRPLEPNTSPDSRAKNRRV 227
             A T+ L  N +     +NRR+
Sbjct: 260 GLASTQNL--NKADPMDPENRRI 280