Pairwise Alignments

Query, 397 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 380 a.a., Response regulator containing a CheY-like receiver domain and an HD-GYP domain from Pseudomonas stutzeri RCH2

 Score = 85.9 bits (211), Expect = 2e-21
 Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 8/168 (4%)

Query: 172 RGEMLDACGVEVHAGLVQGMVDFRSSFTAAHSAGVAEAADALGGYCDLSPERRVVLRIAG 231
           R E L+A    V   L +    ++   T  H   + E+A  +        E    +R+A 
Sbjct: 148 RTEQLNASYQSVICSLSRA-AQYKDDETGQHIIRIGESAALIAAALGQPAEWVERIRLAA 206

Query: 232 LLHDLGKMAVPTSILEKPSGLTKAEFAFMRQHTFHTYRLLRGVDG-----LGGMAAWAAY 286
            +HD+GK+ +P  IL KP  LT  E   M++HT   + +LR  DG     L   A  A Y
Sbjct: 207 PMHDVGKIGIPDHILLKPGTLTDLERKIMQRHTQIGHAILR--DGEESPLLEMAAEIALY 264

Query: 287 HHEKLDGSGYPFHLEGRALDPQARIIGVADIFTAMAEDRPYRKGQGRE 334
           HHE+ DG+GYP  L+G  +   AR++ + D++ A+   RPY++   +E
Sbjct: 265 HHERWDGTGYPHGLKGEEIPLAARVVALCDVYDALRSPRPYKESWSKE 312



 Score = 28.5 bits (62), Expect = 3e-04
 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 15/97 (15%)

Query: 5   AGEIAAVLDLPEVLRRRLFVAALLHDVGALSPEEKMDLYASKVEECDTHCIRGARLLHQV 64
           A  IAA L  P     R+ +AA +HDVG +   + + L    + + +   ++        
Sbjct: 185 AALIAAALGQPAEWVERIRLAAPMHDVGKIGIPDHILLKPGTLTDLERKIMQ-------- 236

Query: 65  DGFGEEGRVLRLHHATLRDGSLADVDEDTARLAQIVH 101
                  R  ++ HA LRDG  + + E  A +A   H
Sbjct: 237 -------RHTQIGHAILRDGEESPLLEMAAEIALYHH 266