Pairwise Alignments

Query, 397 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 413 a.a., HDIG domain protein from Xanthomonas campestris pv. campestris strain 8004

 Score = 88.2 bits (217), Expect = 4e-22
 Identities = 51/135 (37%), Positives = 70/135 (51%), Gaps = 3/135 (2%)

Query: 198 FTAAHSAGVAEAADALGGYCDLSPERRVVLRIAGLLHDLGKMAVPTSILEKPSGLTKAEF 257
           +T  HS  VA     L     L   + V   + GLLHD+GK   P  IL KP  LT  E 
Sbjct: 171 YTYLHSMAVAGLMSGLARQLGLPDAQVVEAAMGGLLHDMGKAVTPLDILNKPGKLTDEEM 230

Query: 258 AFMRQHTFHTYRLL--RGVDGLGGMAAWAAYHHEKLDGSGYPFHLEGRALDPQARIIGVA 315
             +R+H    +RLL   GV     +   A +HHEK+DGSGYP    G  +   +R+  V 
Sbjct: 231 DVIRRHPLDGHRLLLAGGVQN-AVVLEIAMHHHEKMDGSGYPKGQVGEEISLMSRMGAVC 289

Query: 316 DIFTAMAEDRPYRKG 330
           D++ A++ DRPY++G
Sbjct: 290 DVYDAISSDRPYKRG 304



 Score = 27.3 bits (59), Expect = 8e-04
 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 1   VAFIAGEIAAVLDLPEVLRRRLFVAALLHDVG-ALSPEEKMD----LYASKVEECDTHCI 55
           VA +   +A  L LP+       +  LLHD+G A++P + ++    L   +++    H +
Sbjct: 179 VAGLMSGLARQLGLPDAQVVEAAMGGLLHDMGKAVTPLDILNKPGKLTDEEMDVIRRHPL 238

Query: 56  RGARLLHQVDGFGEEGRVLR--LHHATLRDGS---LADVDEDTARLAQIVHLSDLVD 107
            G RLL  + G  +   VL   +HH    DGS      V E+ + ++++  + D+ D
Sbjct: 239 DGHRLL--LAGGVQNAVVLEIAMHHHEKMDGSGYPKGQVGEEISLMSRMGAVCDVYD 293