Pairwise Alignments

Query, 397 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 431 a.a., HDIG domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  162 bits (410), Expect = 2e-44
 Identities = 106/373 (28%), Positives = 175/373 (46%), Gaps = 17/373 (4%)

Query: 1   VAFIAGEIAAVLDLPEVLRRRLFVAALLHDVGALSPEEKMDLYA----SKVEECDTHCIR 56
           V ++A   A  ++  E   + +F   L+HD G     +K D Y      + +    HC+R
Sbjct: 46  VGYMAYSCAQAMEWSEEECQLVFALGLIHDCGVA---QKRDFYRLLENMQPDNTQQHCVR 102

Query: 57  GARLLHQVDGFGEEGRVLRLHHATLRDGSLADVDEDTARLAQIVHLSDLVDRALDR---- 112
           G  LL            +  HH    +     + +   R A ++ L+D VD   +     
Sbjct: 103 GNELLSNCPPLAPFADAILYHHTPWDELKNIAISDRNKRFAALIFLADRVDYLKELYPRD 162

Query: 113 --GRYVLHQADTMCDMARDLARCDFEVSIVRAFLEVARREDFWLQMV---LPTLGQHLEA 167
             G       + +C     L+   FE  +VR    +  +E  W  M    +  +G +L +
Sbjct: 163 EYGNVTQEARNQVCLEIGRLSGSLFERDLVRTMQHLLSKEFIWFSMEHHHIEAMGHNLPS 222

Query: 168 ISPCRGEMLDACGVEVHAGLVQGMVDFRSSFTAAHSAGVAEAADALGGYCDLSPERRVVL 227
            +P   + L    +   A L+  +VD +S FT  HS  VAE    L     L+ E +  L
Sbjct: 223 -TPFFEQKLGVEEIMSIAMLMANVVDAKSQFTFQHSQKVAELCQHLAKELGLNVEMQKAL 281

Query: 228 RIAGLLHDLGKMAVPTSILEKPSGLTKAEFAFMRQHTFHTYRLLRGVDGLGGMAAWAAYH 287
            + GL+HD+GK+  P  IL KP  L ++E+  +++H+  +   L+ V G   +  WA  H
Sbjct: 282 YLTGLVHDIGKLHTPEEILHKPGKLNESEYLCIQRHSTDSRYTLQMVFGQSVVCEWAGNH 341

Query: 288 HEKLDGSGYPFHLEGRALDPQARIIGVADIFTAMAEDRPYRKGQGREGVLRVLRDECTTG 347
           HE+LDGSGYP  L+G A+D  +RII +AD+F A+ + RPYR       V+ ++R E + G
Sbjct: 342 HERLDGSGYPRGLQGAAIDLPSRIIAIADVFQALTQARPYRGSMSLNEVMNIMRHEVSCG 401

Query: 348 RVDGELVETVAES 360
           R+D ++ + +  +
Sbjct: 402 RLDSQVFDVIVRN 414