Pairwise Alignments

Query, 540 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  134 bits (337), Expect = 7e-36
 Identities = 97/301 (32%), Positives = 151/301 (50%), Gaps = 39/301 (12%)

Query: 248 KHETHDYCIAVIRDVTEQHRMRELMIQTEKMHSVGGVAAGMAHEINNPLSAIAQAAQNIE 307
           +H++    I  + D   Q      +IQ+EKM S+G ++AG+AHEINNP+  I    Q + 
Sbjct: 148 EHQSQKVLIKKLEDAQGQ------LIQSEKMASIGQLSAGIAHEINNPVGFITSNLQTLS 201

Query: 308 ------RRLATDLAGNIKAASVTGMDLEALRNYLEARGVPMLLGHIRD-------ACARA 354
                  ++   +   I  +  T ++ EA +  L+   V  +L    +         +R 
Sbjct: 202 DYFNSLEKVLKSITQTIGQSKDTALN-EACQKILKQGQVDFILEDTAELITESLEGSSRV 260

Query: 355 ATIVRNMLDFSRRSDSSRTTCDIEAIIRKALALADNDYDLRKHHDFRSIHISFDCPDDLP 414
            +IV+N+ +FS    S  +  ++E  I   L + +N+    K++     H + + PD   
Sbjct: 261 MSIVKNLKEFSHVDRSEWSYANLENCIESTLKIINNEI---KYNITLEKHYAANVPD--- 314

Query: 415 TITCVPTELEQVIFNLLKNASEAFADIDATDRREDPAIHIAVTTEESYDG-LRLAISDNG 473
            + C P ++ QV+ N+L NAS A                I +T + + D  + + I D G
Sbjct: 315 -VFCQPMQINQVLLNILVNASHAIKGEGT----------ITITLQSAGDDFVEIHIRDTG 363

Query: 474 PGMHEALRRRVFEPFFTTKPPGKGTGLGLSVSYFIITQNHGGEMWVESQPGAGTTFVIRL 533
            G+ E +R R+FEPFFTTKP G GTGLGLSVSY II + H G + V S+ G G+ F IRL
Sbjct: 364 CGIPEEIRERIFEPFFTTKPVGSGTGLGLSVSYGIINK-HNGTISVTSEVGKGSEFTIRL 422

Query: 534 P 534
           P
Sbjct: 423 P 423