Pairwise Alignments

Query, 180 a.a., shikimate kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 596 a.a., 3-dehydroquinate synthase from Herbaspirillum seropedicae SmR1

 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 3/164 (1%)

Query: 16  VTIIGMAGAGKTTVGRELARQMDWAHVDTDSLIEATYGTVLQNVADSMSKEAFLDVEAGI 75
           + ++G+ GAGKTT+GR LA++++   +D+D  IEA  G  +  + +   +E F   EA +
Sbjct: 5   IFLVGLMGAGKTTIGRALAKKLNKRFIDSDHEIEARTGATIPVIFEIEGEENFRRREAEV 64

Query: 76  ICRIGA-KRAVLSTGGSVVYRAEAMRHLASLGPVVYLDVSLPLILERIARNPDRGL--AI 132
           I  + A    VL+TGG  + RAE   +L   G VVYL  S+  IL+R  R+ +R L    
Sbjct: 65  IRELTALPDIVLATGGGAILRAENRDNLKKGGTVVYLRASINQILQRTGRDKNRPLLQTA 124

Query: 133 APGQTIEDLYNERKALYETYQDFTLTADTLTPEECGRAILSWLE 176
            P + +E+L  +R  LY    DF +  +    +   + I+S LE
Sbjct: 125 DPRRKLEELSRQRDPLYRDVADFVIETNRPNVQFLVQTIISHLE 168