Pairwise Alignments

Query, 233 a.a., membrane protein, putaive (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 218 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  100 bits (249), Expect = 2e-26
 Identities = 70/226 (30%), Positives = 113/226 (50%), Gaps = 32/226 (14%)

Query: 16  NAYMRGVYSWMTLGLAVTAAAAWGVASSEALIAFIFG-NTFVFFGLIIAEFALVIGISAG 74
           N  ++  Y  +++ LA +A  AW        IA   G +  +  G  I  F L+      
Sbjct: 16  NKLIKNTYMLLSMTLAFSALCAW--------IATAMGISPLMSLGFAIGGFILLF----- 62

Query: 75  IARLSAGMASGLFLLYS--ALNGLTLSSILLVYAQSA-----VFQAFITTAGMFAVMSIY 127
           +    A  A+GLF +++   + G +L  IL  YA  A     + QAF  T+ +F  +S+Y
Sbjct: 63  VTLRKADTAAGLFWVFAFTGMEGASLGFILNHYAGMANGPELIMQAFGLTSAIFIGLSMY 122

Query: 128 GATTKRDLTSMGSFLMMGLFGIILASVVNIFMRSSMMEFIISAVGVLVFTGLTAYDTQKL 187
             TTK+D + MG FL  GL  I++  ++N+F+ +S    ++S    LVFTGL  +DT ++
Sbjct: 123 ALTTKKDFSFMGGFLFAGLIVIVIGGLINLFVGNSTAYMLLSWATALVFTGLILFDTSRI 182

Query: 188 KAFGENAPMDDAVAIRRGTILGALTLYLDFVNLFIMMVRLFGSSRD 233
              GE              I   ++LYLDF+NLF+ ++R+ G + D
Sbjct: 183 VNGGET-----------NYIRATVSLYLDFLNLFLAILRILGMNND 217