Pairwise Alignments

Query, 233 a.a., membrane protein, putaive (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 219 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 83.2 bits (204), Expect = 4e-21
 Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 30/233 (12%)

Query: 8   SAARVEATNAYMRGVYSWMTLGLAVTAAAAWGVASSEALIAFIFGNTFVFFGLIIAEFAL 67
           S A  +  N  ++  Y  +++ L  +A  A        L   +  +  +  GL I  F L
Sbjct: 9   SHASTQEVNKLLKNTYLLLSMTLGFSALCA-------GLAMVLQISPLMSIGLSIGGFIL 61

Query: 68  VIGISAGIARLSAGMASGLFLLYS--ALNGLTLSSILLVYAQSA-----VFQAFITTAGM 120
           +      +    A  A+GLF +++   + G +L  +L  YA  A     + QA   TA +
Sbjct: 62  LF-----VTLRKAESAAGLFWVFAFTGMEGASLGYMLNHYAGMANGPQLIMQALGLTAVV 116

Query: 121 FAVMSIYGATTKRDLTSMGSFLMMGLFGIILASVVNIFMRSSMMEFIISAVGVLVFTGLT 180
           F  +S Y  TTK+D + M  FL+ GL   I+A + NIF+ S  +   ++A   L+ TG  
Sbjct: 117 FVTLSGYAITTKKDFSFMRGFLLAGLVIAIVAGIANIFIGSGAVFMALNAGIALLMTGFI 176

Query: 181 AYDTQKLKAFGENAPMDDAVAIRRGTILGALTLYLDFVNLFIMMVRLFGSSRD 233
            +DT ++   GE              I   ++LYLDF+NLFI ++ L G+  D
Sbjct: 177 LFDTSRIVNGGET-----------NYIRATVSLYLDFLNLFISILHLLGAGSD 218