Pairwise Alignments

Query, 233 a.a., membrane protein, putaive (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 229 a.a., membrane protein from Herbaspirillum seropedicae SmR1

 Score = 73.9 bits (180), Expect = 2e-18
 Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 24/229 (10%)

Query: 8   SAARVEATNAYMRGVYSWMTLGLAVTAAAAW-GVASSEALIAFIFGNTFVFFGLIIAEFA 66
           S   +   N  +R  Y  + L +  T   AW GV    +L A   G+  + F L +A   
Sbjct: 11  STTSLATRNRVLRNTYWLLALSMIPTVLGAWLGVQLHFSLFA---GSPMISFVLFLA--- 64

Query: 67  LVIGISAGIARL-SAGMASGLFLLYSALNGLTLSSIL---LVYAQSA--VFQAFITTAGM 120
           +  G    I +  ++G+     L ++   GL LS ++   L ++  A  +  AF  TA +
Sbjct: 65  IAFGFFYAIEKTKNSGLGVAFLLGFTFFMGLMLSRLIEFTLGFSNGAGLIMTAFGGTAII 124

Query: 121 FAVMSIYGATTKRDLTSMGSFLMMGLFGIILASVVNIFMRSSMMEFIISAVGVLVFTGLT 180
           F  M+     +KRD + +G +L  G+  I++A++ NIF++   ++  IS V + +F+   
Sbjct: 125 FCGMATIATVSKRDFSGLGKWLFAGVLVILVAALANIFLQLPALQLTISMVAIAIFSAYI 184

Query: 181 AYDTQKLKAFGENAPMDDAVAIRRGTILGALTLYLDFVNLFIMMVRLFG 229
            +D Q++   GE              I   L +YLD  N+F  ++ + G
Sbjct: 185 LFDVQQVVNGGET-----------NYISATLAIYLDVYNVFANLLSILG 222