Pairwise Alignments

Query, 233 a.a., membrane protein, putaive (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 219 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 81.6 bits (200), Expect = 1e-20
 Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 31/241 (12%)

Query: 1   MYNRTMGSA-ARVEATNAYMRGVYSWMTLGLAVTAAAAWGVASSEALIAFIFGNTFVFFG 59
           M  +T+ SA A     N  ++  Y  + + LA +A  A G+A +  +      +  +  G
Sbjct: 1   MTQQTLYSASASTLEVNKLLKNTYLLLAMTLAFSALCA-GLAMALNI------SPLMSLG 53

Query: 60  LIIAEFALVIGISAGIARLSAGMASGLFLLYS--ALNGLTLSSILLVYA-----QSAVFQ 112
           L I    L+      +    A  A+G+F +++   + G +L  +L  YA        + Q
Sbjct: 54  LSIGGLVLLF-----VTLRKADSAAGIFWVFAFTGMEGASLGYMLNHYAGMTNGSELIMQ 108

Query: 113 AFITTAGMFAVMSIYGATTKRDLTSMGSFLMMGLFGIILASVVNIFMRSSMMEFIISAVG 172
           A   T+ +F  +S Y  TTK+D + +  FL  GL  +I A+++NIF+ +S+    I+A  
Sbjct: 109 ALGLTSVIFIALSAYAVTTKKDFSFLRGFLFAGLIVVIAAALINIFVGNSVAFMAINAGL 168

Query: 173 VLVFTGLTAYDTQKLKAFGENAPMDDAVAIRRGTILGALTLYLDFVNLFIMMVRLFGSSR 232
            L+ TG   +DT ++   GE              I   ++LYLDF+NLFI ++ L G   
Sbjct: 169 ALLMTGFILFDTSRIVNGGET-----------NYIRATISLYLDFLNLFIAILHLLGIGN 217

Query: 233 D 233
           D
Sbjct: 218 D 218