Pairwise Alignments

Query, 339 a.a., oligopeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 326 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  229 bits (584), Expect = 7e-65
 Identities = 132/326 (40%), Positives = 189/326 (57%), Gaps = 8/326 (2%)

Query: 11  ALARRMLRKLAWMVVVFLGITVICFWVIHLAPGSPTDLETTMNPLAGAEARKRLESIYGL 70
           AL   +  KLA  V + L + V+ F +IHLAPG P  +       A  E    L + YGL
Sbjct: 2   ALLTHLFGKLANAVALLLAVLVMNFCLIHLAPGDPVQVIAGEMGGASPEVIAALRAKYGL 61

Query: 71  DQPLYVQYAQWLGRLVRLDFGNSMSSDGRPVMERIRERLPLTVGMNVAALFLTLLLAVPI 130
           D  L  Q   +LG++   DFG S   + +PV+  I +RLP T+ +  A+L + +L+   +
Sbjct: 62  DHSLLEQMFTYLGKVAHGDFGYSYYFN-QPVLGLILQRLPATLYLAAASLVVAVLIGTVL 120

Query: 131 GVASAHWQGGWFDRGMTVLVFIGFAMPGFWLALLLMLFFGIHLGWLPLSGLTSLDYATLS 190
           GV SA    G    G+TVL   G A P FW  LLL+L FG     LP++G+T +    ++
Sbjct: 121 GVISARRPNGLLSHGVTVLALAGHAAPIFWTGLLLLLLFGSVWPILPVNGMTDV----VN 176

Query: 191 PWGKFL---DVARHLALPLFIYTFGSLAGMSRFMRSAMLEVLRQDYILTARAKGLPTRTV 247
           P   F    DVA+HL LP        +A  SR  R  M++VL  DYI TARAKGLP R V
Sbjct: 177 PKTGFAYAADVAKHLVLPSITLGLVFVAQYSRLARVNMIDVLSADYIRTARAKGLPERVV 236

Query: 248 IFRHALRNALLPVITILGLSLPGLIGGSVIIESIFALPGLGQLFYTAVMARDYPLIMGNL 307
           + +HALRN L+P++T++GL    L  G+V++E++++ PG+G+L + +++ RDYP +MG L
Sbjct: 237 LVKHALRNTLIPIVTVVGLQFGNLFAGAVLVETVYSWPGMGRLVFDSILRRDYPTLMGVL 296

Query: 308 VLGAVLTQAGNLIADLCYGLADPRIR 333
              AV+  A N++ DL Y L DPRIR
Sbjct: 297 FFSAVMVIAANILTDLVYRLIDPRIR 322