Pairwise Alignments

Query, 339 a.a., oligopeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 343 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  555 bits (1430), Expect = e-163
 Identities = 274/329 (83%), Positives = 300/329 (91%)

Query: 9   LTALARRMLRKLAWMVVVFLGITVICFWVIHLAPGSPTDLETTMNPLAGAEARKRLESIY 68
           + A+ RRM RKLAWM+ VF GIT+I FWVIHLAPGSPTD++TTMNPLAGAE RKRLE++Y
Sbjct: 1   MAAMLRRMARKLAWMLFVFWGITIISFWVIHLAPGSPTDMQTTMNPLAGAETRKRLEALY 60

Query: 69  GLDQPLYVQYAQWLGRLVRLDFGNSMSSDGRPVMERIRERLPLTVGMNVAALFLTLLLAV 128
           GLD+PL+VQY QWLGRL RLDFGNSMSSD RPV ++I+ERLPLTVGMNVA+L LT+L A+
Sbjct: 61  GLDKPLHVQYVQWLGRLSRLDFGNSMSSDPRPVWDKIKERLPLTVGMNVASLVLTMLCAI 120

Query: 129 PIGVASAHWQGGWFDRGMTVLVFIGFAMPGFWLALLLMLFFGIHLGWLPLSGLTSLDYAT 188
           PIGVASAHWQG  FDR MTVLVFIGFAMPGFWLALLLML FGIHL WLPLSGLTSLD+A 
Sbjct: 121 PIGVASAHWQGRLFDRAMTVLVFIGFAMPGFWLALLLMLLFGIHLQWLPLSGLTSLDHAA 180

Query: 189 LSPWGKFLDVARHLALPLFIYTFGSLAGMSRFMRSAMLEVLRQDYILTARAKGLPTRTVI 248
           +SP GK  D+  HLA+P+FIYTFGSLAG+SRFMR++MLEVLRQDYILTARAKGLP RTVI
Sbjct: 181 MSPMGKAWDIMAHLAMPIFIYTFGSLAGLSRFMRASMLEVLRQDYILTARAKGLPVRTVI 240

Query: 249 FRHALRNALLPVITILGLSLPGLIGGSVIIESIFALPGLGQLFYTAVMARDYPLIMGNLV 308
           FRHALRNALLPVITILGLSLPGLIGGSVIIESIFALPGLGQLFY AVMARDYPLIMGNLV
Sbjct: 241 FRHALRNALLPVITILGLSLPGLIGGSVIIESIFALPGLGQLFYQAVMARDYPLIMGNLV 300

Query: 309 LGAVLTQAGNLIADLCYGLADPRIRNSGG 337
           LGAVLT  GNL+ADLCYGLADPRIR +GG
Sbjct: 301 LGAVLTLVGNLLADLCYGLADPRIRLTGG 329