Pairwise Alignments

Query, 339 a.a., oligopeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 350 a.a., ABC transporter permease from Burkholderia phytofirmans PsJN

 Score =  207 bits (528), Expect = 2e-58
 Identities = 122/349 (34%), Positives = 193/349 (55%), Gaps = 28/349 (8%)

Query: 16  MLRKLAWMVVVFLGITVICFWVIHLAPGSPTDLETTMNPLAGAEAR-------------- 61
           +LR+L  MV   LG+  + F V    PG P  +E  M  L     R              
Sbjct: 5   ILRRLLLMVPTLLGVVTLTFVVTQFVPGGP--VEQVMTQLRHGAGRGGEAGAGGGGYHGS 62

Query: 62  --------KRLESIYGLDQPLYVQYAQWLGRLVRLDFGNSMSSDGRPVMERIRERLPLTV 113
                   ++++  +G D+P   +Y   L      D G S       V + I+ +LP+++
Sbjct: 63  QGVDPQQIEQIKKQFGFDKPPLARYLLMLKHYATFDLGQSYYQHDS-VWDVIKSKLPVSI 121

Query: 114 GMNVAALFLTLLLAVPIGVASAHWQGGWFDRGMTVLVFIGFAMPGFWLALLLMLFFGIHL 173
            + +  + LT L++VP+G+A A   G  FD   +VLV  G+A+PGF L +LL++ FG   
Sbjct: 122 TLGLWTVLLTYLISVPLGIAKAVRNGSRFDTVTSVLVLAGYAIPGFVLGVLLLMLFGGGT 181

Query: 174 GW--LPLSGLTSLDYATLSPWGKFLDVARHLALPLFIYTFGSLAGMSRFMRSAMLEVLRQ 231
            W   P+ GLTS ++  LS +GK LD   H+ LP+     G+ A ++   ++  LE + +
Sbjct: 182 FWQVFPMRGLTSDNFNDLSAFGKVLDYLWHIVLPVTASVVGNFAIVTILTKNTFLEEIGR 241

Query: 232 DYILTARAKGLPTRTVIFRHALRNALLPVITILGLSLPG-LIGGSVIIESIFALPGLGQL 290
            Y+LTARAKG P R V+++H LRNA +P++T L  +  G  + G+++IE++F+L G+GQL
Sbjct: 242 QYVLTARAKGAPERDVLWKHVLRNAAIPLLTGLPAAFVGAFLNGNLLIETLFSLDGMGQL 301

Query: 291 FYTAVMARDYPLIMGNLVLGAVLTQAGNLIADLCYGLADPRIRNSGGDR 339
            Y +V+ RDYP+++G+L L  ++     LIAD+CY L DPRI+ +  DR
Sbjct: 302 SYDSVIRRDYPVVLGSLFLFTLIALVTKLIADVCYVLVDPRIQFNRQDR 350