Pairwise Alignments

Query, 411 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 385 a.a., Secretion protein HlyD from Pseudomonas syringae pv. syringae B728a

 Score =  102 bits (253), Expect = 3e-26
 Identities = 106/402 (26%), Positives = 173/402 (43%), Gaps = 54/402 (13%)

Query: 9   ILALILCSIAVGVWLYARRGTADPVIRETATVTRGEVRKTLEATGIIKPQVGAVVKTGSR 68
           ++ ++L  +A G+  Y+ +         TA V R ++  ++ A+G++  Q    V  G++
Sbjct: 10  LIVVVLLVLAAGI-AYSVQSPEKAPEYLTAKVERTDIENSVLASGVL--QGIKQVDVGAQ 66

Query: 69  FTGIIRKLHVKVGDRVEKDEVIAEIDDREQRAQLDEAEAKLRQAEAEAARVETSYPLQIR 128
            +G ++ L V +GD+V++ + +AEID           +  LRQ++     +         
Sbjct: 67  VSGQLKSLKVNLGDKVKQGQWLAEIDPVV-------LQNTLRQSQVNEQNLI-------- 111

Query: 129 EAEAQVQAARAESEYAALTMERKRKLVEQDLDARNSLDEAQQRSRSLSNVLVAREATLDR 188
              AQ  AA A+ + A    +R ++L   D  ++   D AQ            R A L  
Sbjct: 112 ---AQKDAAVAQLKDAKAIYQRYKQLRADDAISQKDFDTAQSDFE-------VRSANLRS 161

Query: 189 LRNEFRTERKRTRQAAEQAKAALETARIRLSYAVIRSPISGIVSQVTAPEGETVVAGFQV 248
           L  + R            A+  +ETARI L Y  I +PISG V  +   EG+TV+A    
Sbjct: 162 LEAQVR-----------DARIQIETARINLGYTRIVAPISGDVVGIVTQEGQTVIASQLT 210

Query: 249 VNLITILDPSRLEMWIYVDETDVGQVRPGLDVEFRVDSQPEKTFRGVVDQIYPQPE---- 304
             ++ + D   + +   V E DV  + PG +V F +    EK +   +    P P+    
Sbjct: 211 PVILKLADLDTMTVKAQVSEADVIHITPGQEVYFTILGDAEKRYYAKLKGTEPAPQNFLD 270

Query: 305 -------IRDNIVYYQALVRLDPATSEHLRPEMTTQCRIIVASKKDVLVIPNDAI--KWV 355
                    ++ V+Y AL  + P     LR  MT Q  I+    KDVL +P  A+  K  
Sbjct: 271 AQSSTASKPNSAVFYNALFDV-PNPDHRLRISMTAQVHIVREKAKDVLTVPVAALGDKNG 329

Query: 356 DGG-RVVFIDDGGKVRRVKPVLGTAGPDVTEVVEGLAEGQKV 396
           DG   V  +D  G+ +      G       E+  GLAEG +V
Sbjct: 330 DGSFPVRVVDAQGQAQSRNVQTGINNNVRVEIKSGLAEGDQV 371