Pairwise Alignments

Query, 411 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 386 a.a., membrane fusion protein of a type I secretion system from Klebsiella michiganensis M5al

 Score =  124 bits (312), Expect = 4e-33
 Identities = 106/412 (25%), Positives = 184/412 (44%), Gaps = 59/412 (14%)

Query: 3   RRRMYAILALILCSIAVGVWLYARRGTADPVIRETATVTRGEVRKTLEATGIIKPQVGAV 62
           RRR   +LAL+     +    Y R   A         + RG++ K + A+GIIKP V   
Sbjct: 7   RRRKAWLLALVAILATIAAVFYQRSLPAQAESLYAVALERGDIEKVVLASGIIKPAVQ-- 64

Query: 63  VKTGSRFTGIIRKLHVKVGDRVEKDEVIAEIDDREQRAQLDEAEAKLRQAEAEAARVETS 122
           V  G++ +G +RKL+V+ G+RV K +++AEID   Q + L  A A+L  A A+    E +
Sbjct: 65  VSVGAQVSGQLRKLYVRQGERVRKGQLLAEIDPTLQLSDLRNATAQLASARAQKLASEAT 124

Query: 123 YPLQIREAEAQVQAARAESEYAALTMERKRKLVEQDLDARNSLDEAQQRSRSLSNVLVAR 182
             +Q R+A A+ +A           M R    V  DL+   +   AQ +  +++   +  
Sbjct: 125 L-VQYRKALARERA-----------MNRDGSGVSSDLEQAQAQYAAQVQQIAVNEAQIV- 171

Query: 183 EATLDRLRNEFRTERKRTRQAAEQAKAALETARIRLSYAVIRSPISGIVSQVTAPEGETV 242
                                  QA+ +++TA   L Y  I +P+ G V  +   EG+T+
Sbjct: 172 -----------------------QAEMSVQTANANLGYTRILAPMDGEVLGIVTREGQTI 208

Query: 243 VAGFQVVNLITILDPSRLEMWIYVDETDVGQVRPGLDVEFRVDSQPEKTFRGVVDQIYPQ 302
           V+      ++ + D  ++++   + E D+ ++ PG  + F V + P+  + G +  + P 
Sbjct: 209 VSSQIAPTILVLADLDKMQVQTRISEADIQKIHPGQPLWFYVIADPQTRYEGELGYVQPA 268

Query: 303 PE--------------IRDNIVYYQALVRLDPATSEHLRPEMTTQCRIIVASKKDVLVIP 348
           P+               + + +YY     +D      L+  MT Q  I +A  KDVL +P
Sbjct: 269 PQEALEEQNAGASAGNQQSSAIYYNGTFEVD-NRQRLLKTSMTAQVFIRIAQVKDVLRVP 327

Query: 349 NDAI--KWVDGGRVVFID--DGGKVRRVKPVLGTAGPDVTEVVEGLAEGQKV 396
             A+     D   +V +    G + R V+  +G       +V+EGL  G++V
Sbjct: 328 VAALGRSLGDERYIVMVQTASGSEERTVR--IGINDRQYAQVLEGLRPGERV 377