Pairwise Alignments

Query, 406 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 107/426 (25%), Positives = 193/426 (45%), Gaps = 38/426 (8%)

Query: 7   ILKSLAAHRTRALLAMLGVFLGALALTAVMHVAGAMVLKADLETQKLGPNLLQALSGQVR 66
           I++ +AA + R  L +L V    L +  ++ V G  +    + T + G   L  +SG   
Sbjct: 7   IMQEMAAEKLRLSLTILAVAWSTLCIAGLLAV-GEGIRSGIVRTIQNGNGNLIHVSGGYA 65

Query: 67  FRRDGPSGVSGVNRTFTLQDAEAILGGVAQVRDGVPYCNAPMPVRYGSIKTTSQLVATLP 126
            +  G     G   + T QD++ +L  +  V+  +P       + +   ++     A   
Sbjct: 66  TQTHGRFH-EGQALSLTEQDSQ-VLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKS 123

Query: 127 GFARVRAYS--PAYGRFISDEDEAGRALVCVLGTAIATRLFERPD-----------NAVG 173
            +  +      P  GR+ +  DE  +  V VLG  +A +LF + +           + VG
Sbjct: 124 EYQAMNKLRLLPG-GRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVG 182

Query: 174 RTVFFFRAPVQVVGVMEEKGQDVS-GTNLDEQVYVPLSTYMRRMANQDWISGVYMNLHDG 232
           +          V+GV+ +   ++  G+ +D   + P ST+ R   NQ  ISG+ +    G
Sbjct: 183 QIAKIGAHEFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQRFHPNQA-ISGINLEPRVG 241

Query: 233 ADEEAARAAVTAILRSRHLIAAGQKDDFSVLSARD----ANKLRKEALDLVQTLGVLSSS 288
           +D +A  A V  +L+ ++   A    D  ++  +D       +++  L L   LG++   
Sbjct: 242 SDRQALAATVQQVLKRKY---AASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIGF- 297

Query: 289 ISFAVGSLGILSIMTLLVRARRLEIGVRRAVGASRNVIVRQFLAEAGLMAGVGGTLGVVV 348
           I+ AV SLGI ++M   V+    +IGVR AVGA+ N I   +LA++ +  G+GG  G+ V
Sbjct: 298 ITLAVASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGV 357

Query: 349 ALALVTVVYAV---GDFPYTY----DPLLAAGACIASV----VLGVAAGAYPAWQASRVD 397
             A+V ++ A+   G+  Y +     P L+    +  +    V+G+ A   PA  A++V 
Sbjct: 358 TFAMVRLLAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKVT 417

Query: 398 VLDVLR 403
            L  L+
Sbjct: 418 PLQALQ 423