Pairwise Alignments

Query, 406 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 647 a.a., transmembrane ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  156 bits (395), Expect = 1e-42
 Identities = 113/389 (29%), Positives = 186/389 (47%), Gaps = 11/389 (2%)

Query: 8   LKSLAAHRTRALLAMLGVFLGALALTAVMHVAGAMVLKADLETQKLGPNLLQALSGQVRF 67
           L++L A+  R +L +LG+ +G  ++ A++ +              +G +LL        F
Sbjct: 261 LRALRANLFRTILTLLGIVIGVGSVVAMLAIGTGAQNSVLDRISSMGSDLLVVRPSMANF 320

Query: 68  RRDGPSGVSGVNRTFTLQDAEAILGGVAQVRDGVPYCNAPMPVRYGSIKTTSQLVATLPG 127
           R  G +G  G N T    DA+AI   +A V   VP   + + +R G+I   +    T+P 
Sbjct: 321 R--GSAG--GTNVTLVPADADAITE-LANVAFAVPEMTSTVTLRRGNIDYQTTANGTVPQ 375

Query: 128 FARVRAYSPAYGRFISDEDEAGRALVCVLGTAIATRLFERPDNAVGRTVFFFRAPVQVVG 187
           F   +++    G FI+  D    A V VLG  +   LF    + +G+ V   + P QV+G
Sbjct: 376 FTEAKSWKIGRGEFINRNDMETYAPVAVLGETVVKTLFPEGSDPIGQYVLVNKIPFQVIG 435

Query: 188 VMEEKGQDVSGTNLDEQVYVPLSTYMRRMANQDWISGVYMNLHDGADEEAARAAVTAILR 247
           VM   G    G + D+ V VPL+T   R+  Q  I  + + + D +  +  +  + A+L 
Sbjct: 436 VMSGMGASAGGNDQDDVVLVPLTTGSMRLFGQRNIRTITVKVQDASAIDLTQERIQALLN 495

Query: 248 SRHLIAAGQKDDFSVLSARDANKLRKEALDLVQTLGVLSSSISFAVGSLGILSIMTLLVR 307
            RH     +KDD  + +     +   E  + ++      ++IS  VG +G+++IM + V 
Sbjct: 496 ERH-----RKDDTQITNMSSVREAFTETSNTMKFFLGSVAAISLLVGGIGVMNIMLVSVS 550

Query: 308 ARRLEIGVRRAVGASRNVIVRQFLAEAGLMAGVGGTLGVVVALALVTVVYAVGDFPYTYD 367
            R  EIGVR A GA    I+ QF+ EA +++ +GG +GVV  L+      A G  P ++ 
Sbjct: 551 ERTREIGVRMATGARERDILVQFIVEALVVSAIGGAIGVVAGLSTGYAAKAFG-MPVSFT 609

Query: 368 PLLAAGACIASVVLGVAAGAYPAWQASRV 396
           P   A A   + + G+  G  PA  ASR+
Sbjct: 610 PGPVALAFACAFLTGLLFGYLPARNASRL 638