Pairwise Alignments

Query, 406 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 650 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  148 bits (374), Expect = 4e-40
 Identities = 116/393 (29%), Positives = 186/393 (47%), Gaps = 20/393 (5%)

Query: 9   KSLAAHRTRALLAMLGVFLGALALTAVMHVAGAMVLKADLETQKLGPNLLQALSGQVRFR 68
           +SL A+  R  L +LGV +G  A+  +M +            Q +G NLL          
Sbjct: 266 RSLRANIFRTALTLLGVVIGVAAVVTMMAIGEGSKQDVLTRIQSMGTNLLLV-------- 317

Query: 69  RDGPSGV--SGVNRTFTLQDAEAI--LGGVAQVRDGVPYCNAPMPVRYGSIKTTSQLVAT 124
           R G  G+  SG + + T  DAEA+  L G+A V        + + VR   I   + +  T
Sbjct: 318 RPGAPGIRPSGTDVSLTPTDAEAVAQLAGMAAVAP--ERMASGITVRREGIDYRTTINGT 375

Query: 125 LPGFARVRAYSPAYGRFISDEDEAGRALVCVLGTAIATRLFERPDNAVGRTVFFFRAPVQ 184
            P +A  + +  A+G F    D    A V VLG  +A  LF   ++ VG        P  
Sbjct: 376 WPAYAAAKDWPMAWGSFFDATDLQASAPVAVLGQTVAKNLFPGEEDPVGSYFLVRNVPFL 435

Query: 185 VVGVMEEKGQDVSGTNLDEQVYVPLSTYMRRMANQDWISGVYMNLHDGADEEAARAAVTA 244
           V+GV+E KG    G + D+ V +PL+T   R++   ++S +   + D    + ++AA+ +
Sbjct: 436 VIGVLEAKGATPFGQDQDDIVLIPLTTAFARVSGGRYLSSLTARVEDATTIDESQAAIES 495

Query: 245 ILRSRHLIAAGQKDDFSVLSARDANKLRKEALDLVQTLGVLSSSISFAVGSLGILSIMTL 304
           +L++RH      K DF V + +   ++ ++  + +  L    + IS  VG +G+++IM +
Sbjct: 496 LLQARH-----GKVDFQVRNTQSLLEMVEKTQNSLTLLLGAVALISLLVGGIGVMNIMLV 550

Query: 305 LVRARRLEIGVRRAVGASRNVIVRQFLAEAGLMAGVGGTLGVVVALALVTVVYAVGDFPY 364
            V  R  EIG+R A GA  + I+ QF  EA  + GVGG  GV + L     V   G  P 
Sbjct: 551 SVTERTREIGIRLATGARASDILLQFNTEAVAVCGVGGLAGVGLGLGAALAVAEFG-LPV 609

Query: 365 TYDPLLAAGACIASVVLGVAAGAYPAWQASRVD 397
            + P     A   + + G+  G  PA +A+R+D
Sbjct: 610 RFTPGPPIVAFCCAFLTGLLFGYLPARKAARLD 642