Pairwise Alignments

Query, 406 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 406 a.a., ABC transporter, permease protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  169 bits (429), Expect = 1e-46
 Identities = 116/410 (28%), Positives = 201/410 (49%), Gaps = 24/410 (5%)

Query: 6   IILKSLAAHRTRALLAMLGVFLGALALTAVMHVAGAMVLKADLETQKLGPNLLQALSGQV 65
           I L++LA ++ RA L MLG+ +G  ++  ++ +          +  ++G N++    G  
Sbjct: 9   IALRALANNKLRAFLTMLGIIIGVASVITMLAIGQGSKRSIQQQISEMGSNMIMIHPGAD 68

Query: 66  RFRRDGPSGVSGVNRTFTLQDAEAILGGVAQVRDGVPYCNAPMPVRYGSIKTTSQLVA-- 123
           R  R G        +T  L D EA+       RD   + +A  P    ++ ++ QL+A  
Sbjct: 69  R--RGGVRQDPSAMQTLKLTDYEAL-------RDETNFLSAISP----NVSSSGQLIAGN 115

Query: 124 -----TLPG----FARVRAYSPAYGRFISDEDEAGRALVCVLGTAIATRLFERPDNAVGR 174
                ++ G    +  +R  S   G   ++ D    A VCV+G  I   LF    + +G+
Sbjct: 116 NNYPSSVSGVGLEYLDIRQLSVESGDMFTEADIQSSAKVCVIGKTIVDNLFPDGSDPIGK 175

Query: 175 TVFFFRAPVQVVGVMEEKGQDVSGTNLDEQVYVPLSTYMRRMANQDWISGVYMNLHDGAD 234
            + F + P +VVGV++ KG +  G + D  V  P +T M+R+    ++ GV+ +      
Sbjct: 176 IIRFNKIPFRVVGVLKAKGYNSMGQDQDNIVLAPYTTVMKRLLAVTYLQGVFASALSEDM 235

Query: 235 EEAARAAVTAILRSRHLIAAGQKDDFSVLSARDANKLRKEALDLVQTLGVLSSSISFAVG 294
            E A   +T ILR  H + A  +DDF++ + ++ + +     DL+ TL    + IS  VG
Sbjct: 236 TEYATDEITEILRRNHKLKASDEDDFTIRTQQELSTMLNSTTDLMTTLLACIAGISLVVG 295

Query: 295 SLGILSIMTLLVRARRLEIGVRRAVGASRNVIVRQFLAEAGLMAGVGGTLGVVVALALVT 354
            +GI++IM + V  R  EIG+R +VGA    I+ QFL EA +++  GG +GV++      
Sbjct: 296 GIGIMNIMYVSVTERTREIGLRMSVGARGVDILSQFLIEAIMISITGGLIGVIIGCGASW 355

Query: 355 VVYAVGDFPYTYDPLLAAGACIASVVLGVAAGAYPAWQASRVDVLDVLRH 404
           +V +V  +P    P     +     V GV  G YPA +A+ +D ++ +R+
Sbjct: 356 IVKSVAHWPIFIQPWSVFLSFAVCTVTGVFFGWYPAKKAADLDPIEAIRY 405