Pairwise Alignments

Query, 295 a.a., hydrogenase, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 258 a.a., dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 68/239 (28%), Positives = 104/239 (43%), Gaps = 32/239 (13%)

Query: 62  PGQVGQLSLFGVGESTFV-----INSPPTRMDYLQFSIMRAGEVTAALHGLKPGDKVGVR 116
           PGQ  +L + G   +TF+     IN    R + + F I   G+ T  L  +  GD + V 
Sbjct: 36  PGQFAELRVDG-SSTTFLRRPISINFVDKRQNEVWFLIQLIGDGTRRLAEVNSGDVINVV 94

Query: 117 APLGNWFPFEDMRGKDIVFVGGGIGMAPLRTLLLYMLDNRADYGN-ITLLYGARTPGDMA 175
            PLGN +         ++ VGGG+G AP    +LY+ +  A  G+  T L GAR+  D+ 
Sbjct: 95  LPLGNGYTMPQKPSDKLLLVGGGVGTAP----MLYLGEQLAKNGHKPTFLLGARSNKDLL 150

Query: 176 FRDDVQDWLGRSDMNTTLTVDQAPDDWPH--RAGLIPHVLLDLAPSNANSVAVLCGPPIM 233
               ++++    ++ TT       +D  H  +  +  H +L+            CGP  M
Sbjct: 151 ---QLEEFAKYGEVYTT------TEDGSHGEKGYVTQHSILNQVHFEQ---IYTCGPKPM 198

Query: 234 IKFTVEALKKLHFADEQIITTLERRMKCGIGICGRC----NIGTKYVCVDGPVFSYAEL 288
           +    +  K      E    +LE  M CGIG C  C      G   VC +GPVF+  +L
Sbjct: 199 MMAVAKYAKSNQIECE---VSLENTMACGIGACLCCVENTTEGHLCVCKEGPVFNINKL 254